Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g3279 ATGGCTACTACCTCTTCTCTTCTCCAACTATCCCAACTCCATTTCCTTTCCCCACAAATCACTCTCCGCAACCGTTTTTCTTTCTCCACACGCTCCATTTCCCGCTTTTCCACCTCCAATGTCACTCTTCGCTCCACGCGAATCCGTGCTTCAAAAGAAGAATCCGCGATAGCAGAACGAGTTAACGACGTGGAATGGAGCGGAAACGGAGTTGCCTCCCGTGCCGGCAGTAATGGAGCAGCAGGAGGTTATGTTAACGGCGCCGTTAACGGAAGTTCAGTGAAATATGGAAATGGAAACGGTGTAGCTTCTACGGTGGTTGTGGATGTTGAAGCTTCTAAAGTGAACGAGGATGGAAGGAAGAGAAGATTGGAGGAGATTGGTAAAGAAGACGCGTGGTTTAAACAAACTGAGGAACAAAAAGTTGAGGTAGCAGTTGCTCCTGGAGGTCGTTGGAGTAGATTCAAGACTTACTCTACAATCCAGAGAACCTTAGAAATTTGGGGATTTGTTGTAACATTTATCTTTAAGGCTTGGTTGGACAATCAGAAGTTCTCTTACAAAGGAGAAATGACTGAGGAAAAAAAGAAGTTAAGGCGGAAGACCCTTGCCAAGTGGCTTAAGGAAAGCATCTTGAGATTAGGTCCTACATTCATTAAAATTGGGCAGCAGTTCTCCACTAGAGTGGACATTCTTCCTCAAGAATATGTTGACCAGTTGTCTGAACTTCAGGATCAAGTTCCTCCATTTCCCTCTGAGAGTGCTTTAGCTATTGTTGAAGAAGAGCTTGGAGCTTCTGTAGGTGATATCTTTGATCAGTTTGACTATGAACCAATAGCTGCTGCAAGTCTTGGTCAGGTTCATCGCGCAAGATTGAAGGGACAGGAGGTTGTTGTTAAAGTGCAAAGGCCTGGTCTCAAGGATCTTTTTGATATTGATCTAAAAAACCTGAGGGTTATTGCTGAATATCTTCAAAAAATTGATCCAAAGTCAGATGGTGCAAAGAGGGATTGGGTTGCTATTTATGATGAATGTGCCTCTGTCTTATATCAGGAGATCGATTACACGAAGGAGGCTGCTAATGCAGAATTGTTTGCTAGTAACTTTAAGAACATGAGTTATGTGAAAGTTCCTTCAATCTACTGGGATTATACCACACCACAGATTCTGACAATGGAATATGTTCCAGGAATTAAAATAAACAAAATACAAGCTTTAGATCAACTTGGTGTTGATCGCGCAAGGTTAGGGAGATATGCAGTTGAATCGTTCTTGGAACAAATTTTATCGCATGGTTTCTTCCATGCTGACCCTCATCCTGGAAATATTGCAGTTGATGATGTCAATGGTGGAAGATTGATCTTCTACGATTTCGGAATGATGGGGAGCATCAGTCCAAACATCCGAGAAGGCTTGCTTGAGACATTTTATGGAGTCTATGAGAAGGATCCAGATAGGGTTCTTCAATCAATGATTCAAATGGGTGTTCTTGTTCCTACTGGAGATATGACTGCTGTTAGGCGAACAGCACAATTCTTTCTTAACAGTTTTGAGGAGCGCCTGGCTGCACAAAGGAAAGAGAAAGAGGAAGCAACAGGTGAACTTGGATTCAAAAAACCATTAAGCAAGGAGGAAAAAATGATGAAAAAGAAACAACGTCTAGCTGCTATTGGTGAAGATTTATTATCCATATCATCAGACCAACCCTTCCGGTTTCCTGCTACATTTACATTTGTTGTTAGAGCTTTCTCAGTGTTGGATGGCATTGGAAAGGGCCTTGACCCACGTTTTGACATTACTGAGATTGCCAAACCTTATGCTCTGGAGTTACTAAGGTTTCGTGAGGCAGGGGTTGAAGTTGTCTTAAAGGACTTCACTAAGAGATGGGATAGACAATCTCAAGCTTTTTACAACTTATTTAGGCAGGCTGACAGGGTGGACAAGCTTGCTTCAATAATCCAAAGACTGGAGCAAGGAGATCTAAAGCTCCGAGTTCGAACTTTAGAATCTGAAAGGGCATTCCAGCGTGTTGCCACAGTCCAGAAGACTATAGGAAATGCAGTAGCTGCTGGAAGCCTAATAAATCTTGCGACAATTTTGTATCTCAATTCGATCCGCGTGCCTGCAATTGCAGCATATGTCTTCTGTGCATTCTTTGGTTTTCAAGTGCTCTTGGGCATTGTAAAGGTCAAGAAGCTAGATGAAACAGAGCGATTGATAACAGGAACTGCATAA 2235 0.4251 MATTSSLLQLSQLHFLSPQITLRNRFSFSTRSISRFSTSNVTLRSTRIRASKEESAIAERVNDVEWSGNGVASRAGSNGAAGGYVNGAVNGSSVKYGNGNGVASTVVVDVEASKVNEDGRKRRLEEIGKEDAWFKQTEEQKVEVAVAPGGRWSRFKTYSTIQRTLEIWGFVVTFIFKAWLDNQKFSYKGEMTEEKKKLRRKTLAKWLKESILRLGPTFIKIGQQFSTRVDILPQEYVDQLSELQDQVPPFPSESALAIVEEELGASVGDIFDQFDYEPIAAASLGQVHRARLKGQEVVVKVQRPGLKDLFDIDLKNLRVIAEYLQKIDPKSDGAKRDWVAIYDECASVLYQEIDYTKEAANAELFASNFKNMSYVKVPSIYWDYTTPQILTMEYVPGIKINKIQALDQLGVDRARLGRYAVESFLEQILSHGFFHADPHPGNIAVDDVNGGRLIFYDFGMMGSISPNIREGLLETFYGVYEKDPDRVLQSMIQMGVLVPTGDMTAVRRTAQFFLNSFEERLAAQRKEKEEATGELGFKKPLSKEEKMMKKKQRLAAIGEDLLSISSDQPFRFPATFTFVVRAFSVLDGIGKGLDPRFDITEIAKPYALELLRFREAGVEVVLKDFTKRWDRQSQAFYNLFRQADRVDKLASIIQRLEQGDLKLRVRTLESERAFQRVATVQKTIGNAVAAGSLINLATILYLNSIRVPAIAAYVFCAFFGFQVLLGIVKVKKLDETERLITGTA* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g3279 744 CDD ABC1_ADCK3-like 243 491 - -
Mtr3g3279 744 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 4 742 - -
Mtr3g3279 744 Coils Coil 514 534 - -
Mtr3g3279 744 PANTHER ABC TRANSPORTER-LIKE PROTEIN 4 742 - -
Mtr3g3279 744 SUPERFAMILY Protein kinase-like (PK-like) 244 488 IPR011009 -
Mtr3g3279 744 Pfam ABC1 atypical kinase-like domain 242 490 IPR004147 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g3279 Mtr-Chr3 46686557 46702723 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g3279 - - gmx:100801705 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3279 3 46686557 46702723 Mtr3g3279 3 46686557 46702723 ECH
Mtr3g3279 3 46686557 46702723 Mtr1g0143 1 1600327 1609353 PCT