Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0143 ATGGAATCCTTCTGCGTCAACTCTCTGTACACAGTTTCTCCTCAATTGACTCTCTCGCCCAGAATCGAGCAGAGGAAAGTGCGGAGAGTGCGAATTTCGAATTTGGCTTCGACCACTGGAAACGGCGCGGTTGTGAGGCCGTTGCAGCTGCCTAGTAATTCAAAGTCGAATAACAGTGCGTTGGAGCAGCTTGACATTGAGCGTGGTGTTTGTATACCTTTCCGCAAGTACTCACCTGAGATTGTGAGGAATAAGGTATTAGGATCAAGAGGATCTATTTTGTCTCTAATTTCACGAGGAGTGGAGATAGTTTTGAGTCTGGGCTTGTATTGGTCTGCCTTGGTGTATGATTTCCTTGTTGGAAGAGATGAAGAAGTTGTTCCATTTCGTGCTCGACAGCTTAGGAACCTCTTGTGTGATCTGGGGCCTTCATTTATTAAAGCTGGTCAGGTCCTTGCAAACAGGCCAGATATCATTAGAGAAGATTATATGAGTGAACTTTGCATTCTTCAAGACGATGTCCCTTCATTTCCCAATCAAATTGCCTTCGGTATCATAGAGGAAGAACTGGGTCAGCCCCTTGAAACTGTTTTCAGCAGCATCTCATCAGAGACTATAGCAGCTGCGAGTTTAGGTCAAGTTTACCGTGCTACTTTACGTGCCACTGGCGAGGATGTTGCTATAAAGGTTCAAAGGCCCGGGATAGAGCCCATAATTTATCGAGATCTTTTCCTATTTCGTACTTTAGCTTCATTCTTAAACGGCATCAGTATACAGAAACTGGGTTGTAATGCTGAGCTGATTGTTGATGAATTTGGTGAAAAGCTTTTGGAAGAGCTTGATTATACATTGGAAGCCCGCAATATTGAAGATTTTCTAGAAAATTTTAAAAACGACCCCACTGTCAAAATTCCTCTTGTTTACAAACAACTTTCTGGGCCACGTGTATTAGTGATGGAATGGATTGATGGTATTAGGTGCACCAATCCACAGGCAATTAAAGAAGGTGGTATTGATCTAGATGGATTTCTAACAATTGGTGTGAGTGCTGCACTTAGACAATTGTTGGAATTTGGATTATTTCATGGAGACCCTCACCCTGGAAATATTTTTGCCATGCGTGATGGACGGATTGCATATGTGGACTTTGGCAATGTTGCTGTTCTTAGTCAGCAAAATAAACAGATTTTAACTGATGCTGTTGTACACGCTGTGAATGAGGACTATGCTGAAATGGCTAATGATTTCACCAGATTAGGCTTCCTGGCAGCAGGGACTGATGTCTCTCCAATAGTTCCTGCTTTAGAAGCAATTTGGCAAGACTCTGCTGGAAAAGGACTGGCAGATTTTAATTTTCGCAGTGTCACTGGGAAGTTTAACCAGTTGGTTTACAATTATCCCATTCGAATCCCAGAAAGGTTTTCACTCGTAATTCGTTCTTTATTGACTCAAGAAGGCATATGTTTTACTCTGAAGCCTGACTTCAAATTTCTTGAGGTTGCATATCCATATGTGGCTAAGCGACTACTAACAGATCCAAATCCAGCTCTACGTGAACGACTCGTACAGGTTCTATTCAAAGATGGCCTTTTCCAGTGGAAACGGCTTGAAAACCTTATTGTTCTTGCAAAGGAAAATGTGGCCAAGATGAGCAGCAATCCAGCATTGCAAGTGAAAAACACGCAAACCCAGAGAAACTGGAAAGTTAATAAAAAATTGGACCTTACTGATACAATCAAAGATGGAGCTCGCCTTTTCTTTGTTGACGAAGGAATCCGCCGGCAGCTTCTACTTGCTTTGACCGAGGACTCAAAGCTTCATATAGAAGAGCTTGTCGATGTATATAGGTTGGTTGAAGATCAGATAGATATACCCTCAGTGGCCGTAGAAGTAGCTCGAGACTTCCCAACTGTTGTCAGGGATCTCCTACTTTCATGGAGCGAGTCAGTCTTATCTGATAGATAG 1965 0.4254 MESFCVNSLYTVSPQLTLSPRIEQRKVRRVRISNLASTTGNGAVVRPLQLPSNSKSNNSALEQLDIERGVCIPFRKYSPEIVRNKVLGSRGSILSLISRGVEIVLSLGLYWSALVYDFLVGRDEEVVPFRARQLRNLLCDLGPSFIKAGQVLANRPDIIREDYMSELCILQDDVPSFPNQIAFGIIEEELGQPLETVFSSISSETIAAASLGQVYRATLRATGEDVAIKVQRPGIEPIIYRDLFLFRTLASFLNGISIQKLGCNAELIVDEFGEKLLEELDYTLEARNIEDFLENFKNDPTVKIPLVYKQLSGPRVLVMEWIDGIRCTNPQAIKEGGIDLDGFLTIGVSAALRQLLEFGLFHGDPHPGNIFAMRDGRIAYVDFGNVAVLSQQNKQILTDAVVHAVNEDYAEMANDFTRLGFLAAGTDVSPIVPALEAIWQDSAGKGLADFNFRSVTGKFNQLVYNYPIRIPERFSLVIRSLLTQEGICFTLKPDFKFLEVAYPYVAKRLLTDPNPALRERLVQVLFKDGLFQWKRLENLIVLAKENVAKMSSNPALQVKNTQTQRNWKVNKKLDLTDTIKDGARLFFVDEGIRRQLLLALTEDSKLHIEELVDVYRLVEDQIDIPSVAVEVARDFPTVVRDLLLSWSESVLSDR* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0143 654 Pfam ABC1 atypical kinase-like domain 170 414 IPR004147 -
Mtr1g0143 654 CDD ABC1_ADCK3-like 170 416 - -
Mtr1g0143 654 ProSiteProfiles Protein kinase domain profile. 200 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g0143 654 PANTHER CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED 23 654 - -
Mtr1g0143 654 PANTHER PROTEIN ACTIVITY OF BC1 COMPLEX KINASE 1, CHLOROPLASTIC 23 654 - -
Mtr1g0143 654 SUPERFAMILY Protein kinase-like (PK-like) 171 388 IPR011009 -
Mtr1g0143 654 Gene3D Transferase(Phosphotransferase) domain 1 199 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0143 Mtr-Chr1 1600327 1609353 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0143 - - gmx:100790292 1121.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g3279 3 46686557 46702723 Mtr1g0143 1 1600327 1609353 PCT