Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2895 ATGGGGAGAGGCAAAGGAGGGAAGAGCCGAACTCAGCGCAAGCACTTCCAGCATAACAGAGAGAACGTTTGGAAGCAACCGCGTCCAGAATCATCATCCATTACAAATAATCTTTTCGATATTCAAAATCCCGATTTCGATCACTATTACAAGGAGCAGAACATCGTTTCACTCGAAGAATGGGATTCGTTTATGCAAGTTCTCCGAACTCCATTACCTGCAGCATTTAGAATCAATTCCAGTAGCCTTTTTCATGCTGATATTCGGTCTCAACTAGAAAATGATTTTGCACCTGCACTTCAGGCCATGGTTGATGAAGTGGATGAGGAGGAAGCTATTAGACCTTTGCCATGGTATCCTAACAATCTTGCTTGGCATTCTAATTTTTCCCGTATGCAGCTTAGGAAGAATCAATCACTTAAGAGGTTTCATGAATTCTTAAAGCTAGAAAATGAAATTGGAAATATTACGAGACAGGAAGCTGTTAGCATGGTGCCTCCTCTGTTCTTAGATGTACATTCAAATCATGTTGTACTTGATATGTGTGCTGCGCCAGGTTCAAAAACATTCCAATTGCTTGAGATTTTACATAGATCAACTAAAGCAGGATCACTGCCTGATGGAATGGTTGTAGCAAATGATCTAGATGTACAAAGATGTAATCTTCTCATCCACCAAATAAAACGAATGTGCACAGCAAATCTAATTGTCACCAACCATGAAGCTCAGCACTTCCCAAGATGTCAGTTGAACATGGATTGTGATATAATGGGTCCAGATCAGCATAATTCCCAACTGCTATTTGATCGTGTTCTATGTGACGTACCATGCAGTGGGGATGGTACCCTCCGCAAGGCACCCGATCTCTGGAGGAGATGGAACACAGGGACAGGAAATGGGCTTCACAACCTACAAATTTTAGTTGCCATGCGAGGCCTATCTTTACTTAAAGTTGGTGGAAGAATGGTTTATTCAACCTGCTCAATAAATCCTATTGAGAATGAAGCTGTCATTGCAGAGATTTTGCGGAGGTGTGAAGGGTCTATTGAACTTGTTGATGTCTCCGGTGAGCTTCCCCAACTTATTTGTCGTCCAGGTCTAAAGACATGGAAGGTATGTGACAAGGGCAAGTACTTGGTTTCCTGTAAAGAGGTTCCCAAGGTTCTTAGAAATGTAGTTCTCCCCAGCATGTTTCCAAATGGCGGAAGCTATCAAGATACTGACTGTAACAGTAATTGCGATGTTAACGGACATTCTGAAGATGGTGTTCAAGAAGCAGAGAATCATATGATGCATGAGTTTACTGAGGAACTTTCTGATTTCCCACTCGATCGATGCATGCGGTTACTGCCCCATGATCAGAACTCTGGAGCCTTCTTTATAGCCGTATTGCAAAAAGTTTCTCACCTGCCAGCAATTGAGGTAAAAATCAGAAAAAAAGTTGATAGGCAACATGTAGAATCAGTAAACCAGGGAAATGAGGATGCACAAGTATTGCAGATTAATCCATCAGAAAGTACACGCGACGAAGAAGTTTGTGAACAAGTTTCCGAGGATAATAAAAATGAACCCAACACTGCAGATTTGAAATTTAGTCCTGTTATAGATGAAGGAGATTCCGAGGAAGCCCAGGAGCCCCACAATGAAGAAAACATGGCAAAGATCACTCCAAGCAAAAGAAAGCTTCAGATACAAGGCAAATGGAGAGGCGTTGACCCTGTTGTCTTCTTCAAAGATGAAGCAATTATTAAGAGCATAAAGGCATTTTATGGTATCAATGAGCATTTTCCATTAGATGGTCACCTTTTGACAAGAAACAGCGATACAAGCAATGTAAAAAGACTTTACTACATCTCCAAGCCAGTTAAGAATGTTCTTGAGTTGAACTTGTCAGTTGGACAGCAACTGAAAATAACTTCTGTTGGCGTGAAAATTTTTGAAAGACAAAAGTCACGTGAAGGTAGGTCTGTAGAATGTGCTTTCCGAATCACTTCTGAAGGATTGCCTCTTATCCTCCCTCACATCACCAAACAGATCCTAAGCGCATCTCCTATAGATTTCAAGCATCTTCTCCAGTATAAAAATATAAAATTTGCAGAATTTGTGGATGCCAAATTTGGTGAAAAGGCAACAAACCTAATGCCAGGCTGTTGTGTGGTAGTTCTGGGCGAAGGTAACAGAACCGCCGCAGAGGCCCTCCATGTGCATGAATCATCAATAGCCATTGCATGCTGGAAAGGCGGGGCAAGTTTGACTGTGATGGTTACTTCAATAGAATGCCAAGAACTGCTTGAAAGGCTTTTAATGCGTTTAGACAGAGCCACTGAAAAGGGCTCCTCCATTGATGAGAAGTGA 2355 0.417 MGRGKGGKSRTQRKHFQHNRENVWKQPRPESSSITNNLFDIQNPDFDHYYKEQNIVSLEEWDSFMQVLRTPLPAAFRINSSSLFHADIRSQLENDFAPALQAMVDEVDEEEAIRPLPWYPNNLAWHSNFSRMQLRKNQSLKRFHEFLKLENEIGNITRQEAVSMVPPLFLDVHSNHVVLDMCAAPGSKTFQLLEILHRSTKAGSLPDGMVVANDLDVQRCNLLIHQIKRMCTANLIVTNHEAQHFPRCQLNMDCDIMGPDQHNSQLLFDRVLCDVPCSGDGTLRKAPDLWRRWNTGTGNGLHNLQILVAMRGLSLLKVGGRMVYSTCSINPIENEAVIAEILRRCEGSIELVDVSGELPQLICRPGLKTWKVCDKGKYLVSCKEVPKVLRNVVLPSMFPNGGSYQDTDCNSNCDVNGHSEDGVQEAENHMMHEFTEELSDFPLDRCMRLLPHDQNSGAFFIAVLQKVSHLPAIEVKIRKKVDRQHVESVNQGNEDAQVLQINPSESTRDEEVCEQVSEDNKNEPNTADLKFSPVIDEGDSEEAQEPHNEENMAKITPSKRKLQIQGKWRGVDPVVFFKDEAIIKSIKAFYGINEHFPLDGHLLTRNSDTSNVKRLYYISKPVKNVLELNLSVGQQLKITSVGVKIFERQKSREGRSVECAFRITSEGLPLILPHITKQILSASPIDFKHLLQYKNIKFAEFVDAKFGEKATNLMPGCCVVVLGEGNRTAAEALHVHESSIAIACWKGGASLTVMVTSIECQELLERLLMRLDRATEKGSSIDEK* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2895 784 MobiDBLite consensus disorder prediction 486 551 - -
Mtr3g2895 784 MobiDBLite consensus disorder prediction 1 15 - -
Mtr3g2895 784 Pfam 16S rRNA methyltransferase RsmB/F 169 346 IPR001678 GO:0008168
Mtr3g2895 784 MobiDBLite consensus disorder prediction 490 506 - -
Mtr3g2895 784 ProSitePatterns NOL1/NOP2/sun family signature. 268 279 IPR018314 GO:0003723|GO:0008168
Mtr3g2895 784 ProSiteProfiles SAM-dependent MTase RsmB/NOP-type domain profile. 64 467 IPR001678 GO:0008168
Mtr3g2895 784 PANTHER NCL1 YEAST -RELATED NOL1/NOP2/FMU SUN DOMAIN-CONTAINING 1 784 IPR023267 GO:0001510
Mtr3g2895 784 Gene3D Vaccinia Virus protein VP39 40 466 IPR029063 -
Mtr3g2895 784 MobiDBLite consensus disorder prediction 534 551 - -
Mtr3g2895 784 PANTHER TRNA (CYTOSINE(34)-C(5))-METHYLTRANSFERASE-RELATED 1 784 - -
Mtr3g2895 784 MobiDBLite consensus disorder prediction 507 525 - -
Mtr3g2895 784 PRINTS RNA (C5-cytosine) methyltransferase signature 179 189 IPR023267 GO:0001510
Mtr3g2895 784 PRINTS RNA (C5-cytosine) methyltransferase signature 269 281 IPR023267 GO:0001510
Mtr3g2895 784 PRINTS RNA (C5-cytosine) methyltransferase signature 319 335 IPR023267 GO:0001510
Mtr3g2895 784 PRINTS RNA (C5-cytosine) methyltransferase signature 449 466 IPR023267 GO:0001510
Mtr3g2895 784 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 50 467 IPR029063 -
Mtr3g2895 784 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 125 146 IPR023270 GO:0016428
Mtr3g2895 784 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 353 372 IPR023270 GO:0016428
Mtr3g2895 784 PRINTS RNA (C5-cytosine) methyltransferase NCL1 subfamily signature 636 648 IPR023270 GO:0016428
Mtr3g2895 784 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2895 Mtr-Chr3 42865464 42872956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2895 K15334 - gmx:100808598 1151.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr8g3112 8 41716863 41724741 Mtr3g2895 3 42865464 42872956 PCT