Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2813 ATGTGTTTCACCAATTTGGTCAATCAAGATAAAACAACTCATACGCGAAGCAAAAGCAATCATTGTTTAACCATTGAGGCTCTGGATAAAGATGATAGCCCTATTCTACCTGGGCTTCCTGATGATGTTGCAAAGTATTGTCTTGCACTTGTTCCCCGTTCCAACTTCCCAGCTATGGGTGGTGTCAGCAAGAAATGGAGGTTGTTTATTCGGAGCAAAGAATTTGTGATGGTGCGAAAATTGGCAGGGTTGCTTGAGGAATGGCTCTATTGCTTAACGTTGGACAGTGAAGGGAGGGAAAGCCATTGGGAGGTCATGGATAGTCTCGGTCGCAAATGTCGATCCCTTCCACCAATGCCTGGTCCAGCAAAGGCTTCGTTCGGGGTTGTGGTTCTTAACGGAAAGCTTCTTATCATGGCTGGCTATTCAGCTATTGAAGGAACTGTTGTTGCCTCAGATGAGGTTTACCAATATGATTCTTACCTTAACAGTTGGAGCAGATTATCAAACATGAATGTGGCTCGTTATGACTTCGCTTGTGCCGAAGTGGACGGCTTGGTTTATATTGTTGGAGGCTATGGGGTGAATGGCGACAATCTCTCTAGTGTTGAGATGTACGATCCAGATACTGACAAGTGGACACTGATAGAGAGCCTTCGTCGCCCAAGGTGGGGTTGCTTTGCTTGTGGATTTGAGGATAAGCTCTATGTCATGGGTGGAAGGTCAAGCTTCACTATTGGAAACTCCAAGTTTGTTGATATATATAACCCCGAGAAGCACAGCTGGTGCGAGATTAAGAATGGCTGTGTTATGGTCACAGCTCATGCAGTATTGGAAAAGAAGTTGTTTTGCATTGAGTGGAAAAATCAGCGGAAGCTGGCAATATTCAGTCCTGAAAACAACTCATGGACAATGGTACCCGTCCCATTGACAGGGAGCTCAAGTGTTGGTTTTCGATTCGGGATACTGGACGGAAAGCTGTTGCTATTTCCGGTTGAGAAAGAACCTACTAATCAAACATTGTCATATGATCCAAACGCGGCTTCGGGGTCAGAGTGGCAAACTTCAGACATAAGGCCATCTGGTTTATGCTTGTGCAGTGTAACAATGAAGGCATGA 1119 0.4513 MCFTNLVNQDKTTHTRSKSNHCLTIEALDKDDSPILPGLPDDVAKYCLALVPRSNFPAMGGVSKKWRLFIRSKEFVMVRKLAGLLEEWLYCLTLDSEGRESHWEVMDSLGRKCRSLPPMPGPAKASFGVVVLNGKLLIMAGYSAIEGTVVASDEVYQYDSYLNSWSRLSNMNVARYDFACAEVDGLVYIVGGYGVNGDNLSSVEMYDPDTDKWTLIESLRRPRWGCFACGFEDKLYVMGGRSSFTIGNSKFVDIYNPEKHSWCEIKNGCVMVTAHAVLEKKLFCIEWKNQRKLAIFSPENNSWTMVPVPLTGSSSVGFRFGILDGKLLLFPVEKEPTNQTLSYDPNAASGSEWQTSDIRPSGLCLCSVTMKA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2813 372 SMART kelc_smart 135 185 IPR006652 GO:0005515
Mtr3g2813 372 SMART kelc_smart 186 233 IPR006652 GO:0005515
Mtr3g2813 372 SMART kelc_smart 234 282 IPR006652 GO:0005515
Mtr3g2813 372 PANTHER KELCH REPEAT F-BOX PROTEIN 1 372 - -
Mtr3g2813 372 SUPERFAMILY Kelch motif 86 346 IPR015915 GO:0005515
Mtr3g2813 372 Pfam Kelch motif 174 219 IPR006652 GO:0005515
Mtr3g2813 372 Pfam Kelch motif 125 172 IPR006652 GO:0005515
Mtr3g2813 372 Gene3D - 75 371 IPR015915 GO:0005515
Mtr3g2813 372 PANTHER OS02G0202900 PROTEIN 1 372 IPR045887 -
Mtr3g2813 372 Pfam Kelch motif 223 266 IPR011498 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2813 Mtr-Chr3 42122919 42126148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g2813 39 217 Miscellaneous Gene Families AT4G33900 29.016 1.96e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2813 - - gmx:100802912 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2813 3 42122919 42126148 Mtr3g2813 3 42122919 42126148 ECH
Mtr3g2813 3 42122919 42126148 Mtr8g2792 8 38602454 38605034 PCT