Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2564 ATGATCAAACAGATACTTGGTAAAATACCGCGAAAGTCGTCAAAATCATCATCACATAGTGATTTTAACGGTGATGGAGGGTTGGTCAATGGTGGCTTTGGTTCATCATTGAATTCATCTTCCGATGACACCTTGAAATCTAATTCAGCTTCTTCAAAATCTTCAAGTTCTGGGAATGGGAGTTCTGCCTCGACGAATTCAAATAAAACAAACCAAGCTAAGAAATCAGCTCCTGCAATTGGATCCCAAGTTGGTTTGATAATGGCTAATGGTAATGGAGGTTACGAGGCTTTGCCGAGTTTCCGGGATGTTTCTAGCTCGGAAAAGCCTAATCTTTTTATAAGGAAGTTAAATATGTGTTGTATTGTATTTGATTTTAGTGATCCTAGCAAGCATGTTAAAGAGAAGGATATCAAGAGGCAAACTTTGCTTGAACTTGTTGATTATATTTCATCTGTGAATTCAAAGTTCAATGAAGCGGCAATGCAAGAGATTACCAAGATGGTGGCTGCAAATTTGTTTAGAACACTGCCATGTTCAAATCATGATGGTAAGGTTGCAGAAGCATATGATCCTGAAGAAGAGGAACCTGCAATGGAACCGGCATGGAATCATCTACAGGTTGTGTATGAAGTTCTCTATAGATTTGTGGCTTCACCAGAGACGGATGCAAAGCTTGCTAAACGATACATTGATCATTCATTCGTGTTGAGACTGCTTGACCTCTTTGACTCTGAGGATCAAAGAGAGAGGGAATATTTGAAGACTATTCTTCACCGTATTTATGGGAAGTTCATGGTACATCGCCCGTTCATTCGAAAAACTATCAATAACATATTTTATCAGTTCATATTTGAGACAGAAAAACACAACGGAATTGCAGAAATGTTGGAGATTTTGGGCAGTATAATTAATGGATTTGCTTTGCCTTTGAAGGAAGAGCATAAGCTGTTCCTTACCCGAGCATTGATCCCACTTCACAAGCCAAAGTGTGTCTCTATGTATCATCAACAACTTTCTTATTGCGTTACGCAGTTTGTTGAGAAAGATGTCAAGTTAGCTGATACTGTGATTAAAGGCCTTCTGAAATATTGGCCTGTAACTAATAGTGCAAAGGAGGTAATGTTCCTTGGTGAGCTTGAGGAAGTTTTAGAAGCCACTCAAGCAGCTGAATTTCAGAAATGTGCGGTGGGATTGTTTCGTCAAATTGCTAGATGCCTCACCAGCCTACACTTTCAGGTAGCTGAACGGGCACTGTTTCTGTGGAACAACGATCATATTAGAAATTTGATAATACAAAACTGCAAAGTGATACTACCGATAATCTTCCCTGCTTTGGAGAAAAATGCACGGGGCCACTGGAACCAAGCTGTCCAGAGTTTGACTCTGAATGTGAGAAAAATATTCTCAGATGCTGATCATTCACTTTTCGATGAATGCATGATCAAATTCCAAGAAGATGAAATCAAGGAACGAGAGAAGCAAGAGAAGCGGGAATCCATGTGGAAGAAATTGGAAGATGTGGCTGTTGCATCCACGTCTATAAGCAATGAAGCAGTTCTTGCCTCAAGGTTTGCTTCCTCTCTTGCCGTTGCTGCAGTTCAATGA 1608 0.4005 MIKQILGKIPRKSSKSSSHSDFNGDGGLVNGGFGSSLNSSSDDTLKSNSASSKSSSSGNGSSASTNSNKTNQAKKSAPAIGSQVGLIMANGNGGYEALPSFRDVSSSEKPNLFIRKLNMCCIVFDFSDPSKHVKEKDIKRQTLLELVDYISSVNSKFNEAAMQEITKMVAANLFRTLPCSNHDGKVAEAYDPEEEEPAMEPAWNHLQVVYEVLYRFVASPETDAKLAKRYIDHSFVLRLLDLFDSEDQREREYLKTILHRIYGKFMVHRPFIRKTINNIFYQFIFETEKHNGIAEMLEILGSIINGFALPLKEEHKLFLTRALIPLHKPKCVSMYHQQLSYCVTQFVEKDVKLADTVIKGLLKYWPVTNSAKEVMFLGELEEVLEATQAAEFQKCAVGLFRQIARCLTSLHFQVAERALFLWNNDHIRNLIIQNCKVILPIIFPALEKNARGHWNQAVQSLTLNVRKIFSDADHSLFDECMIKFQEDEIKEREKQEKRESMWKKLEDVAVASTSISNEAVLASRFASSLAVAAVQ* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2564 535 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 98 509 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr3g2564 535 PIRSF PP2A_B56 3 533 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr3g2564 535 SUPERFAMILY ARM repeat 110 491 IPR016024 -
Mtr3g2564 535 MobiDBLite consensus disorder prediction 32 76 - -
Mtr3g2564 535 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A 55 KDA REGULATORY SUBUNIT B' DELTA ISOFORM 1 523 - -
Mtr3g2564 535 MobiDBLite consensus disorder prediction 1 76 - -
Mtr3g2564 535 MobiDBLite consensus disorder prediction 10 24 - -
Mtr3g2564 535 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 523 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr3g2564 535 Gene3D - 106 508 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2564 Mtr-Chr3 39674269 39680172 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2564 K11584 - rcu:8282540 775.393
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0182 1 2071441 2074628 Mtr3g2564 3 39674269 39680172 PCT