Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0182 ATGCTGAAGCAAATTTTCAACAAGCTTCCCCGGAAGACATCCAAAACCTATTCGGATGAGTCGTCTCGAGTTGATTCATCACGTGCCGCAGGTAAAAGCCACCAGCGACCGCAGGGTGCCGCTGCTTCGTTGAAACGAGCTTCGTCGTCTGCGGTGTTTCCTGCCAGCATGGTTTCTGGTATTGAACCTTTGGTGCCATTTAAGGATGTTCCAAATGCTGAAAAGATGAACTTGTTTGTGAGCAAATTGAGCCTTTGTTGTGTGACATTTGATTTCACTGATCCTGGTAAGAATGTTGCTGAGAAAGATGTGAAAAGGAAAACTTTGGTTGAACTTGTTGATTTTGTGGCTTGTGGATCAATGAAGTTTAGTGAACCTGCTATTCTTGCAATGTGTAGAATGTGTGCTATTAATTTGTTTAGAGTTTTTCCACCGAATTATAGGGCTAATGGTGTTGTTGCTAGTGGCGGTGAGACTGATGATGATGATCCTATGTTTGATCCTGCTTGGCCACATTTACAACTTGTTTATGAATTGCTGCTTAAATTTATATCTTCAACGTGTCTTGATGCTAAGGTAGCGAAAAAGTATATCGATCATTCATTCATTTCCAAGTTGCTTGAATTGTTTGATTCTGAGGATCCTAGAGAAAGAGATTGTTTGAAAACAATTCTGCATAGGGTTTATGGGAAGTTCATGGTGCATAGACCCTTTATTCGGAAATCGATTAACAACATATTCTACCGATTCGTGATTGAAACTGAGAAACATAATGGGATTGCTGAGTTGTTGGAGATTTTCGGGAGTGTGATTAGTGGATTTGCTTTACCTTTGAAAGAGGAACACAAAATCTTCTTGTGGAGAGTTTTGATCCCCTTGCACAAGCCTAAATCTTTGGGGGTCTACTTTCAGCAACTGTCCTTCTGTATTACGCAGTTCTTAGAAAAGGAACCAAAGCTAGCAAGCATTGTTATAAGCGGTTTGTTAAAATATTGGCCAGTAACAAATAGTCAGAAAGAAGTGATGTTTTTGGGTGAATTGGAAGAAATTATGGAAGGAATTAACATGGTAGAGTTCCAAAGGATCATGGTTCCGCTGTTTTTGCGGATCGGGTGCTGCATTAACAGCCTACACTTTCAGGTAGCTGAAAGGACCCTTTTCTTATGGAACAACGACCACATTGTAAATTTGATTGCTCATAACCGTCAAGTGATTCTGCCCATCATATTTCCAGCACTTGATAAGAATATCAAAAGCCACTGGAACCCAGCAGTTGTAAACTTAACTCATAATATCAGAAAGATGTTCTTGGAGATGGATGAGAAGCTTTTCATATCTTGTCATACTAACTTTAAGGAGGATGAAGCAATTTTAATCTCGGAAGCCGAGAAGCGAAAGGAGGCATGGAAACAACTAGAGCAAGCTGCCAGTCTCAAACCTGTAATTGGAAATACTGCTGTCTTAGTGTCTCCTTTGATGACATGA 1485 0.402 MLKQIFNKLPRKTSKTYSDESSRVDSSRAAGKSHQRPQGAAASLKRASSSAVFPASMVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPGKNVAEKDVKRKTLVELVDFVACGSMKFSEPAILAMCRMCAINLFRVFPPNYRANGVVASGGETDDDDPMFDPAWPHLQLVYELLLKFISSTCLDAKVAKKYIDHSFISKLLELFDSEDPRERDCLKTILHRVYGKFMVHRPFIRKSINNIFYRFVIETEKHNGIAELLEIFGSVISGFALPLKEEHKIFLWRVLIPLHKPKSLGVYFQQLSFCITQFLEKEPKLASIVISGLLKYWPVTNSQKEVMFLGELEEIMEGINMVEFQRIMVPLFLRIGCCINSLHFQVAERTLFLWNNDHIVNLIAHNRQVILPIIFPALDKNIKSHWNPAVVNLTHNIRKMFLEMDEKLFISCHTNFKEDEAILISEAEKRKEAWKQLEQAASLKPVIGNTAVLVSPLMT* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0182 494 PIRSF PP2A_B56 5 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr1g0182 494 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 66 476 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr1g0182 494 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT 1 490 - -
Mtr1g0182 494 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Mtr1g0182 494 Gene3D - 71 475 IPR011989 -
Mtr1g0182 494 MobiDBLite consensus disorder prediction 9 41 - -
Mtr1g0182 494 SUPERFAMILY ARM repeat 77 472 IPR016024 -
Mtr1g0182 494 MobiDBLite consensus disorder prediction 13 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0182 Mtr-Chr1 2071441 2074628 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0182 K11584 - gmx:100781390 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0182 1 2071441 2074628 Mtr3g2564 3 39674269 39680172 PCT