Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g2055 ATGTCTCAGAGCTCTGAGGAGGATACTGATATAAGTGATTCTGAGATAGGTGAGTATGAGGAAAAATGTTATGAAGAACTGAAAAGTGGAAGTCAGAATGTGAAAACCTCGGATGAGAAGTTCACTTGTCCATACTGTCCTAAGAAAAGAAAACGGGATTATTTGTACAACGAACTCCTACAACATGCTTCTGGCGTGGGTCAGAGTAGTTCACAGAAGAGAAAGCCAAGAGAAAAGGCTACTCATTTGGCTTTAGTGAAATATTTGGAAAAGGATCTGATGAATATAGATACTCCATCAAAACCAACTGAAAACTGTGCTGATAACGGTGACACAGACACTTCTATTGATTCTGATGAGCAGTTTGTGTGGCCTTGGATTGGAATTATAGTTAATATTCCCACTAGCAGGGCACAAGATGGGCGTGCTGTTGGGGCGAGTGGTTCCAAGCTTAGGGATGAGTATAGACGCAGGGGTTTCAATCCATATCGAGTCAATCCTCTATGGAATTTTCGAGGTCACTCTGGAACTGCCCTTGTGGAATTCTATAAAAACTGGCCCGGCTTAGATAATGCACTCGCATTTGAAAAAGCATATGCATCAGACCATCACGGGAAAAAGGATTGGTTTGTTAATACAGAGCCAAAGTCGGGTCTTTATGCATGGGTTGCCCGAGCTGATGACTACAAAAAGAACAATATCATTGGTGAATATCTGCGAAAGATGGGCGATATCAAAACCATACCTGAACTTCAGGAAGAAGAAGCTCGAAGGCAGGATAAACTCGTGTCCAATTTGACCAACATTATTCAGGTCAAAAATAAGCACTTACATGAGATAGAAGCAAGATGCACCGAGACTACAGCCAAAATGAATTCTGCCATGACAGAAAAAGATCAGCTCATTCAAGCTTATAATGAAGAGATAAAGAAAATACAGTCAAGTGCTAAGGATCACTTCCAAAGGATTTTTAATGATCACGAAAAGCTTAAGTCGCAACTGGAAACTCAGAAAAGTGAGCTTGAGTCGCGGAGAATCACATTGGAAAAGCGTGAAGCACATAATGAAAGTGAAAGAAGAAAGTTGCTAGAAGAGATGGAGGAGAATGCAACGAGAAATAGCTCTCTTCAGATGGCTTCTCTGGAGCAACAGAAAGCAGATATAAATGTTATGAAACTGGCTGAAGATCAGAAGAAACAAAAAGAACAGCTCCATGCTAAAATCATTCAGCTTGAAAGACAACTGGATATGAAACAAAAGCTGGAACTGGAGATTCAGCAACTAAAAGGATCACTAAGTGTGTTGAAGCACATAGAAGATGACGAAGATGTAGAAGTTTTGAAGAAGGTAGATGATTTGCATATGGGTTTAAGGGAGAAGGAACAGTCACTTCAAGACTTAGATGCACTGAACCAAACACTAATCATCAAGGAGCGTAAGAGTAACGATGAGCTGCAAGATGCTCGAAAAGAATTGATCAGTGGCATTAAAGATATAGGAACTCGAGTCCATATTGGTGTGAAGAGAATGGGGGAACTTGATACTGGACCGTTCCTTGAAGCTATGAAGAAAAGATATAATGAGGAGGAAGCTGAAGACAAAGCATCAGAACTATGTTCATTGTGGGAAGAGTATCTAAAAGACCCAGATTGGCATCCATTCAAAGTTGTCATGAATGAAGGGAAAGAAAAGGAAATTATTAAAGATGATGATGAAAAGCTGAATGGACTAAGAAAAGAAGTGGGTGAAAAGGCATATAGTGCCGTGGTGGCATCTTTAACGGAGATTAATGAATATAATCCTAGTGGGAGATATGTAACCTCAGAGTTATGGAACTATAAAGCGGGAAGGAGAGCAACTTTGCAAGAAGGAGTGAAGTTTTTGTTGGACTACTGGAAACGCAAGAAGAAAGGAATGTTGTGA 1923 0.402 MSQSSEEDTDISDSEIGEYEEKCYEELKSGSQNVKTSDEKFTCPYCPKKRKRDYLYNELLQHASGVGQSSSQKRKPREKATHLALVKYLEKDLMNIDTPSKPTENCADNGDTDTSIDSDEQFVWPWIGIIVNIPTSRAQDGRAVGASGSKLRDEYRRRGFNPYRVNPLWNFRGHSGTALVEFYKNWPGLDNALAFEKAYASDHHGKKDWFVNTEPKSGLYAWVARADDYKKNNIIGEYLRKMGDIKTIPELQEEEARRQDKLVSNLTNIIQVKNKHLHEIEARCTETTAKMNSAMTEKDQLIQAYNEEIKKIQSSAKDHFQRIFNDHEKLKSQLETQKSELESRRITLEKREAHNESERRKLLEEMEENATRNSSLQMASLEQQKADINVMKLAEDQKKQKEQLHAKIIQLERQLDMKQKLELEIQQLKGSLSVLKHIEDDEDVEVLKKVDDLHMGLREKEQSLQDLDALNQTLIIKERKSNDELQDARKELISGIKDIGTRVHIGVKRMGELDTGPFLEAMKKRYNEEEAEDKASELCSLWEEYLKDPDWHPFKVVMNEGKEKEIIKDDDEKLNGLRKEVGEKAYSAVVASLTEINEYNPSGRYVTSELWNYKAGRRATLQEGVKFLLDYWKRKKKGML* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g2055 640 Coils Coil 324 351 - -
Mtr3g2055 640 Coils Coil 394 438 - -
Mtr3g2055 640 CDD RRM_like_XS 122 229 IPR005380 GO:0031047
Mtr3g2055 640 Pfam XS zinc finger domain 43 86 IPR005381 GO:0031047
Mtr3g2055 640 Pfam XH domain 508 637 IPR005379 -
Mtr3g2055 640 PANTHER RIBONUCLEASE P SUBUNIT P38 1 48 IPR045177 GO:0080188
Mtr3g2055 640 PANTHER RIBONUCLEASE P SUBUNIT P38 49 639 IPR045177 GO:0080188
Mtr3g2055 640 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 49 639 - -
Mtr3g2055 640 PANTHER XS DOMAIN-CONTAINING PROTEIN-RELATED 1 48 - -
Mtr3g2055 640 Pfam XS domain 119 230 IPR005380 GO:0031047
Mtr3g2055 640 Coils Coil 302 322 - -
Mtr3g2055 640 Gene3D XS domain 115 285 IPR038588 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g2055 Mtr-Chr3 33928853 33936409 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g2055 - - gmx:100812353 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2055 3 33928853 33936409 Mtr3g2055 3 33928853 33936409 ECH
Mtr3g2055 3 33928853 33936409 Mtr5g2716 5 35395096 35403169 PCT