Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1984 ATGTTATTGTTCCAACATTGCAAAAACAAAAACAAAATGTATCTCTTTCTCGTTGTTCTCTTCTTCTCTATCAACCCTTCTCAACAAACAAACTCACTCTCACTCTCTTTTCCTCTAACATCACTCTCTCTCTCCAATGACACAACCTCAAAAATGCTATACACATCTCAACTATTTTCAACAACAAAAAAACCCAACAACCCACAAAACAAAACACCTTCATATAACTACAAATTTTCCTTCAAATATTCGATGGCTCTCATCATTAACCTCCCCATTGGAACACCACCTCAAACTCAACCAATGGTGTTGGACACTGGTAGCCAACTTTCATGGATTCAGTGTCACAAAAAACAACCTCCAACAGCATCCTTTGATCCTTCTCTCTCTTCAACTTTCTCTATCCTCCCTTGTACTCACCCTCTCTGTAAACCACGAATTCCCGATTTTACCCTCCCAACTTCTTGTGACCAAAACCGTCTCTGCCACTATTCCTATTTTTACGCAGACGGCACTTATGCTGAGGGTAATCTCGTCAGAGAAAAATTCACATTCTCACGTTCCGTTTCTACCCCTCCTTTAATCTTGGGCTGTGCTACAGAATCCACTGACCCTAGGGGTATTTTAGGAATGAATCTTGGTCGTTTATCCTTTGCTAAACAATCCAAAATTACTAAATTCTCCTATTGTGTACCTCCACGTCAAACTCGACCCGGTTTTACTCCAACCGGATCGTTTTATCTAGGTAACAACCCGAGTTCCAAGGGGTTTAAGTACGTCGGCATGATGACTTCTTCTCGTCAACGCATGCCGAATTTTGACCCCTTGGCTTATACCATCCCGATGGTCGGGATAAGAATTGCCGGTAAGAAATTAAATATTTCACCGGCAGTTTTTCGGGCCGACGCAGGCGGATCAGGTCAAACCATGATTGATTCCGGATCAGAATTTACTTATTTAGTTAGTGAAGCTTATGATAAAGTGCGGGCTCAAGTAGTTAGAGCTGTGGGGCCCAGATTAAAGAAGGGTTACGTGTACGGTGGAGTAGCTGACATGTGTTTTGACAGTGTAAAAGCAGTTGAAATCGGACGGCTGATAGGTGAGATGGTCTTTGAATTTGAAAGAGGTGTGGAGGTTGTGATTCCAAAGGAAAGAGTACTTGCTGACGTGGGTGGTGGGGTCCACTGTGTTGGGATTGGAAGTTCAGATAAATTAGGTGCTGCAAGTAATATTATTGGAAACTTTCATCAACAAAATCTATGGGTGGAATTTGATCTTGTGAGGCGTAGGGTGGGGTTTGGTAAGGCTGATTGTAGCAGATTAGTGAAGTAG 1332 0.4234 MLLFQHCKNKNKMYLFLVVLFFSINPSQQTNSLSLSFPLTSLSLSNDTTSKMLYTSQLFSTTKKPNNPQNKTPSYNYKFSFKYSMALIINLPIGTPPQTQPMVLDTGSQLSWIQCHKKQPPTASFDPSLSSTFSILPCTHPLCKPRIPDFTLPTSCDQNRLCHYSYFYADGTYAEGNLVREKFTFSRSVSTPPLILGCATESTDPRGILGMNLGRLSFAKQSKITKFSYCVPPRQTRPGFTPTGSFYLGNNPSSKGFKYVGMMTSSRQRMPNFDPLAYTIPMVGIRIAGKKLNISPAVFRADAGGSGQTMIDSGSEFTYLVSEAYDKVRAQVVRAVGPRLKKGYVYGGVADMCFDSVKAVEIGRLIGEMVFEFERGVEVVIPKERVLADVGGGVHCVGIGSSDKLGAASNIIGNFHQQNLWVEFDLVRRRVGFGKADCSRLVK* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1984 443 Gene3D Acid Proteases 81 245 IPR021109 -
Mtr3g1984 443 Pfam Xylanase inhibitor N-terminal 89 237 IPR032861 -
Mtr3g1984 443 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 102 113 IPR001969 GO:0004190|GO:0006508
Mtr3g1984 443 CDD pepsin_A_like_plant 88 438 IPR034161 -
Mtr3g1984 443 Pfam Xylanase inhibitor C-terminal 277 434 IPR032799 -
Mtr3g1984 443 PANTHER ASPARTYL PROTEASE-RELATED 13 443 IPR001461 GO:0004190|GO:0006508
Mtr3g1984 443 SUPERFAMILY Acid proteases 88 441 IPR021109 -
Mtr3g1984 443 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 13 443 - -
Mtr3g1984 443 Gene3D Acid Proteases 246 442 IPR021109 -
Mtr3g1984 443 ProSiteProfiles Peptidase family A1 domain profile. 87 434 IPR033121 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1984 Mtr-Chr3 32901271 32903177 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1984 93 443 Miscellaneous Gene Families AT1G44130 23.410 3.35e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1984 - - gmx:100806624 681.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1984 3 32901271 32903177 Mtr5g2652 5 34565904 34567607 PCT