Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1583 ATGGATGGAAAAAGCTCTCTTCAAATAACAAAAGCTTCTGGTGCTTATGATGATGATGGACATGCAAAAAGGACTGGAAATTTAAAGAGTGCTGTGGCTCATATCATCACAGCAGTTATTGGTTCTGGTGTTCTGTCATTGGCATGGAGTACTGCTCAATTAGGATGGATTGGAGGACCAGTTACCTTGCTTTGTTGTGCAATAGTTACTTATATTTCTTCATTCCTTTTATCTGATTGTTACAGAAATCCTGATTCGGTAACTGGGAAAAGGAACTACTCTTACATGGATGCTGTTAGAGTTAATCTTGGTAATAAAAGGACATATGTGGCTGGTTTCCTTCAATTTTTGACCTTGTATGGGACTGGTGTTGCCTATGTACTTACCACAGCCACAAGTTTGAAGGCTATCATGAGATCAAATTGCTATCATAAAGAAGGACACCAAGCTCCTTGTAGATATGAGGCTAATATATATATGGTGTTGTTTGGAGTTGTTCAGATTGTAATGTCGTTCATACCGGATCTCCATAACATGGCTTGGGTTTCAGTTGTTGCCGCACTAATGTCCTTTACATACTCATTCATTGGACTAGGACTTGGCATATCAACAGTCATAAAAAATGGAAGAATTATGGGAAGTATAACAGGAGTACAAAAAGCTAAAGTTGCTGACAAAATCTGGTTAATCTTCCAGGCAATTGGTGACATTAGTTTTTCCTATCCATATTCAATTATCCTTCTTGAGATACAGGACACACTAGAGTCTCCTCCACCAGAGAATCAAACAATGAAAAAGGCTTCCATGGTTGCAATCTTCATTACAACATTCTTCTACCTATGCTGTGGATGCTTTGGATATGCAGCTTTTGGAGATGCTACACCAGGAAATCTCTTGACAGGGTTTGGATTTTTTGAGCCTTATTGGCTTATTGACATTGCCAATGTTTGTATTATCATTCATTTGGTTGGAGGCTATCAGATATACAGTCAACCAATATATAGTACTGCTGATAGATGGTTCACAAAAAAATACCCCAACAGTGGCTTTGTGAACAATTTCCACAAAGTGAAACTTCCTCTATTACCTTCTTTTGAGATAAACCTTTTCAGATTCTGTTTTAGAACAAGCTATGTGATTTCAACCACTGGACTTGCAATTCTATTTCCTTACTTCAACTCAGTTCTAGGATTATTAGGAGCCATAAATTTCTGGCCATTGGCTATATATTTCCCAGTTGAAATGTACTTTGTACAGAAGAAAGTTGGAGCTTGGACTAGAAAATGGATTGTTCTAAGGATTTTTAGCTTTGCTTGCTTCCTTGTCACCATGGTTGGATTTGTTGGATCATTTGAAGGAATCATAAGTGAGAAAATTAGAGGAAAAGGTTAA 1392 0.375 MDGKSSLQITKASGAYDDDGHAKRTGNLKSAVAHIITAVIGSGVLSLAWSTAQLGWIGGPVTLLCCAIVTYISSFLLSDCYRNPDSVTGKRNYSYMDAVRVNLGNKRTYVAGFLQFLTLYGTGVAYVLTTATSLKAIMRSNCYHKEGHQAPCRYEANIYMVLFGVVQIVMSFIPDLHNMAWVSVVAALMSFTYSFIGLGLGISTVIKNGRIMGSITGVQKAKVADKIWLIFQAIGDISFSYPYSIILLEIQDTLESPPPENQTMKKASMVAIFITTFFYLCCGCFGYAAFGDATPGNLLTGFGFFEPYWLIDIANVCIIIHLVGGYQIYSQPIYSTADRWFTKKYPNSGFVNNFHKVKLPLLPSFEINLFRFCFRTSYVISTTGLAILFPYFNSVLGLLGAINFWPLAIYFPVEMYFVQKKVGAWTRKWIVLRIFSFACFLVTMVGFVGSFEGIISEKIRGKG* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1583 463 Pfam Transmembrane amino acid transporter protein 25 455 IPR013057 -
Mtr3g1583 463 PANTHER TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN 6 459 - -
Mtr3g1583 463 PANTHER OS05G0424000 PROTEIN-RELATED 6 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1583 Mtr-Chr3 27647582 27651196 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr3g1583 10 442 Organic Solute Cotransporters AT1G77380 53.563 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1583 K24917 - gmx:100818535 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1583 3 27647582 27651196 Mtr5g3472 5 43551990 43555747 PCT