Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1414 ATGATCATGGATTCCCCACAATCTGTTGTATCACCCTTTAGAACCTCAGTCTTGGGTGAGGGTGAGAAGCACAAGTCTGATGTTACCACACAAAGCAATGGTCCTTCCTCTAAGGATATTGAAGTCAACGGGAAGGAAACTATCATGTCAAATGCCGAGGAATGCGTTGGAGTGCTCGATGTTTATATACATCAGGCTAGGGACATTCAGAATATTTGCATATACCACAAGCAAGATGTTTATGCTAAGATTTACCTGACAAGTAATCCGGAGAACAGCGTCTCTACTAAGACCATTAATGGAGGTGGAAGGAACCCTGTGTTTAACGACAATCTTCGTCTCAATGTTTGGGATGTTGATTCGTCTCTCAAATGTGAGCTATGGATGCTTAGCAGGGTGAAGAATTATCTTGAAGATCAGTTGCTTGGTTTTGCTTTGGTGCCGTTGTCAGAAGTACTAGTCCAGAATGGTAAACTAGAGAAAGAGTTTTCTCTTTCTTCAACTGATCTGTTTCATTCTCCTTCAGGTTTTGTTCAATTGTCCATTGCTTACACCGGTGCTACACCTGATGTTATGGCAATATCTGCTATGCCGGGGAAAGTGGCTACGCATGTCACTCAGCAGGACTCGGAAACATGTGAGTCATTGGCCAGAGATTTGGATAAAATTGAGTTTCCAGATCCTAAGATTGTAAACGAAGACCACTTAATGGTTTCGGAATACTTTGGCATTTCATGTGAGGAGACTCAGTGCTCTGATAGCTTGGCAACTTCTGATGCTGAAAATCATAGTTCGGAAGCTGGTGTTCGTCTTGTGGAAAGCTTCTCAGCATGCAGTGGTGAGTCTGTACATGTGGAACCTCCTAAGGTTGAGTCTCCACCAAGCAGTGTGTCAACAAATGGGGTTTCTTCTCCTTCTGCTCATGAAAGCTCAGAATCATCTGATGCTGCAGCAGCTTCTAAGTCCCCAAGTCATGAACAAGTTTCAGGAACCAAAGAGGTGAAAAAAGTGGATGTTAAAGACGGTGAGAGTGATTCCTCAAGTGTTGTTCCGAGTGATTTATTCCCTAAGCCTGTTGTGACTGTGAATATGCCAGAGCCGCAGATGGTTCAGCAGGATATAGTTGACATGTACATGAAAAGTATGCAGCAATTTACCGAGTCATTAGCGAAAATGAAGCTTCCTATGGACATCGAAAGTGAACCAACTACTTCAGGAAATTCAAGTACTGAGCAGAAACTACCGCAAACTAAGAACGCTAACTCCCGTGTCTATTATGGAAGCAGAGCTTTCTTCTGA 1299 0.4311 MIMDSPQSVVSPFRTSVLGEGEKHKSDVTTQSNGPSSKDIEVNGKETIMSNAEECVGVLDVYIHQARDIQNICIYHKQDVYAKIYLTSNPENSVSTKTINGGGRNPVFNDNLRLNVWDVDSSLKCELWMLSRVKNYLEDQLLGFALVPLSEVLVQNGKLEKEFSLSSTDLFHSPSGFVQLSIAYTGATPDVMAISAMPGKVATHVTQQDSETCESLARDLDKIEFPDPKIVNEDHLMVSEYFGISCEETQCSDSLATSDAENHSSEAGVRLVESFSACSGESVHVEPPKVESPPSSVSTNGVSSPSAHESSESSDAAAASKSPSHEQVSGTKEVKKVDVKDGESDSSSVVPSDLFPKPVVTVNMPEPQMVQQDIVDMYMKSMQQFTESLAKMKLPMDIESEPTTSGNSSTEQKLPQTKNANSRVYYGSRAFF* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1414 432 MobiDBLite consensus disorder prediction 292 327 - -
Mtr3g1414 432 ProSiteProfiles C2 domain profile. 44 163 IPR000008 -
Mtr3g1414 432 PANTHER EXPRESSED PROTEIN 3 432 - -
Mtr3g1414 432 Gene3D C2 domain 52 211 IPR035892 -
Mtr3g1414 432 MobiDBLite consensus disorder prediction 1 42 - -
Mtr3g1414 432 SMART C2_3c 58 161 IPR000008 -
Mtr3g1414 432 MobiDBLite consensus disorder prediction 282 352 - -
Mtr3g1414 432 MobiDBLite consensus disorder prediction 28 42 - -
Mtr3g1414 432 MobiDBLite consensus disorder prediction 328 343 - -
Mtr3g1414 432 Pfam C2 domain 57 164 IPR000008 -
Mtr3g1414 432 MobiDBLite consensus disorder prediction 400 421 - -
Mtr3g1414 432 MobiDBLite consensus disorder prediction 398 421 - -
Mtr3g1414 432 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 3 432 - -
Mtr3g1414 432 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 56 186 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1414 Mtr-Chr3 25435065 25437830 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1414 - - gmx:100804602 654.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1414 3 25435065 25437830 Mtr5g3348 5 42412341 42415277 PCT