Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1364 ATGACACTCTTGAATCTATTCTTTCTATTACACCTTATATTAATTCCAACTAGTGGCTATGTTCAACCCTTTAAAGATGGTTTCATCTCTGGTGTTATATCTAACAAGGGTCTTGATTTTGCTAAGGATTTGTTGATAGAGAAATGTATTGAAACTATTGTTCTTCTTAAGTTACCTAAGATTGAGAATACTGCATATGTCCCACTTGTTGGAAATGCTAAGGTGACTCTGTCTGATATCATGATTAAGGATGTTCAAGTTAATGATTCTTCAGTGATTATTAGAGAGAGTGGTATAGTTGTGGTTTTTTCTGCTGCTACTGTTGATTTGAGTATGAAGTGGAAGTATACTGTGAGCTCTTGGTTGATTCCTTTTGGGATTTCTGGTAGTGGGACTGCTTCAATTAAGGTTACAGGCATGCAAGTGGGGCTTACATTAAATTTAAAGAGCAAAGACGGAACTCTTAAGTTGAGTCTCTTAGATCATGGATGCTATGTGGGAGATTTATCCATAAAGTTGGATGGTGGAGCAGCTTGGCTTTACCAATTGCTAGTAGACGCTTTTCAAGATATTATAGCATCTTCAGTTGAAGAAGCCATTTCAGATCAAATAACAGAAGGGATAGTAAAGCTTGATAATATTTTGCAAGCTCTTCCAAAGCAAGTATCACTAGATAAAACTGTTTCACTAAATGTTTCATTTGTTGGCAATCCTGTGTTGAGTAATTCCTCAATTGCAATTGCAATTAACGGTTTATTCGCAAGGACAAGTGAAGTTTTTGTACCTCAAAGTTACAAGAACGGATTCAAGGTTTCTTCTGCCTGTGGTGGTTTACCAAAGATGATAAAGGTTTCAATACATGAAGATGTGTTCAAATCTGCTTCCCTAGTTTACTTCAATGCAGGTAAACTGCAAATGGTTATCGATGAACTACATGATCAGGCCCTTCTGAACACTGCTGGATGGAGATTCATAGTTCCACAATTATACAAGCGATATCCAAACGATGACATGCAGATTAATATCTCTGCATCATCTCCACCTGTTATACAAGTGTCATACCAAGATATTGGTGCCACTCTTTCTGTAGATATAACAATTGATGTTCTAGAAGGTGGTGAAATCATACCTGTTGCATGCATTTCAGTGGATGTAAGTGCTTCATGTGGTGTGGAAATTATAGGAAACAATCTTTCTGGTAGCCTTAAATTACAACAATTTTCTGCATACTTGAAATGGAGCAAAATAGGAAAACTGCACATACGTCTTATTCAGTCGCTGATATCAAGTGTCCTCAAAACAGCTGTCCTACCATACTTGAACCACCAATTAAAGAGTCTCCCCTTGCCAAATATTGATGGTTATGGATTTCAGAATACTGTTATCTTGTACAATTATCCATGGATTTCATTGTGTAGTGATTTTTCCTTTACAGAAGATGACTACTATTTTATTCAACACTCAAATTATGTATCATAA 1479 0.3624 MTLLNLFFLLHLILIPTSGYVQPFKDGFISGVISNKGLDFAKDLLIEKCIETIVLLKLPKIENTAYVPLVGNAKVTLSDIMIKDVQVNDSSVIIRESGIVVVFSAATVDLSMKWKYTVSSWLIPFGISGSGTASIKVTGMQVGLTLNLKSKDGTLKLSLLDHGCYVGDLSIKLDGGAAWLYQLLVDAFQDIIASSVEEAISDQITEGIVKLDNILQALPKQVSLDKTVSLNVSFVGNPVLSNSSIAIAINGLFARTSEVFVPQSYKNGFKVSSACGGLPKMIKVSIHEDVFKSASLVYFNAGKLQMVIDELHDQALLNTAGWRFIVPQLYKRYPNDDMQINISASSPPVIQVSYQDIGATLSVDITIDVLEGGEIIPVACISVDVSASCGVEIIGNNLSGSLKLQQFSAYLKWSKIGKLHIRLIQSLISSVLKTAVLPYLNHQLKSLPLPNIDGYGFQNTVILYNYPWISLCSDFSFTEDDYYFIQHSNYVS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1364 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 33 242 IPR017943 GO:0008289
Mtr3g1364 492 SMART bpi2_2 276 473 IPR001124 GO:0008289
Mtr3g1364 492 PIRSF Lipid_binding_protein 2 481 IPR030675 GO:0005615|GO:0008289
Mtr3g1364 492 Gene3D - 32 463 - -
Mtr3g1364 492 PANTHER LBP/BPI/CETP FAMILY, CARBOXY-TERMINAL DOMAIN PROTEIN 1 492 - -
Mtr3g1364 492 PANTHER OS06G0309200 PROTEIN 1 492 IPR045897 -
Mtr3g1364 492 Pfam LBP / BPI / CETP family, C-terminal domain 277 461 IPR001124 GO:0008289
Mtr3g1364 492 SUPERFAMILY Bactericidal permeability-increasing protein, BPI 245 477 IPR017943 GO:0008289
Mtr3g1364 492 Gene3D - 36 216 - -
Mtr3g1364 492 Pfam LBP / BPI / CETP family, N-terminal domain 37 209 IPR017942 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1364 Mtr-Chr3 24792934 24801112 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1364 K05399 - gmx:100815362 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1364 3 24792934 24801112 Mtr5g3333 5 42237489 42242273 PCT