Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr3g1315 ATGTTCGTATTATTATGTATATCTTGGACTTGTTCTTATTCTTTCTCTTATACTATAAATACATGCATGTTCTTAATTTTCTTCAGTTATATTCTGTGCAGTGCAATGGAGCTTCACGTTGGTAATTCCTTCGTCTCGAAAGCTCGAACCGTTCTCCATTCTGCTGCTGTCAAAGCTGAGCGTGTTCTCAATGACTTCAAATCTGATCTTGCTGGTGAAGATTTTGATAAGCATTTGCGTGAGGATGACGGAATGCAAAGAAATCAGGAAGATGACTATGCCAAGGATGAGAATGAGTCAAAGTTTCTTGTTGAACTGAAGCAGATAAAGTGGAGACCTCGACATTTCGGAACAAAGCAGCACTGGAAAGATAGAATTAACAATATTCGGAAAGGGAGGAAAGAATCCGAAGATACAGATAAAGTTGAAGATGCAAGCATGGATGTTATTCCACTATTTGATGAAATGTGTGTCCTTCATGTGGAAAATGATCTTGATGCCAAGGGTTCAGAAGCGTTTTCCTCGGTTGAAGGTTTAACTGTTGCGGCTAGAAGGCTTATTCCTCCATCTTCTGTCCTAAAGCAATTGGCTATCGCTGTTGAGGCTGGTATGAAAGCAAATTCAATGAAAAATTTTGCAGCTTCAACAGAAGGTTCTTCACCTTCCATAGAGAAGGCAGGGTTGCGTCTCTCTGCAGTGAAGGCATTAGTGCTACGTGAGAAGGAGGACAAACTTACCTCTGAATTCACCAGCAAAGAGAAATTTGTGTATTTGATTAGTTCTCTTTTCAATCCAGAGGGGTATTTCCTTAGAAGGAAGATCAACTCCAATCAAGAGGAGATTGAGATACCATCTTTAATAAGAGATATTCATGGTGCTCCTCCTGAAAGCCTTGTTGTTAAACTAGCTGAAGTAATCGGAAACTTGAAGACCCTTCGAGAAATGGAAATTTTTTGGTGCAGGGTTATTGCTGAAATAAGAAAACTTTGGTCCGAAGAAAAGCATTTACCTGGAGTCCCCCTTGATGACATTCCAGATCTGAAGTCATGTCTTCTCAATCAACAATTTCAAGTAATTAACTGCTGCATCTCTCGGAAAAGGCGCCATATCATTGCAAGTGAATCCCTGGACTATATGTTGATGGAAGCAAATTCAAACAATACACCGGAATCAACAAACTGTTGTGATGGTACTTCTGCAAGTCGCTTATTATATGCTCGATTAAGTACTGGAGAGCTTGTTCTTCGACTTGGTGCTCATTGTCCATCCGGAAACCTTACGTTATTGGAAACTGGCGAGCCTGCATACTCTCCTATCACCCAGGAAGCACCGTTGCTTACAGAAGATCTGATCAAAGAGACTGAGGAGCTTATACTGCAGACGGGGAGTTTTGGTGCCGGGTGCTCCCAACTCCTGTCTGATATGCAGGCTTTCAAGGCTGCAAATCCCGGTTGTATTTTGGAAGACTTTGTGAGATGGTACTCTCCTCCTGATTGGACTGAAATTGAGGCAAGTACTGAGGATAGTTGTTCTTCTGATGGTAGTGGTAGCGATTCTTCGTCTAACAGAGGTCATCTAAGTCGACGGATGCGAAAAGAAGGTAATTTGTGGCGCGAATTGTGGGAAACATCTAAGCCAGTACCTGCTGTGAAACAAGCACCTCTCTTTGATGAGGATTTGACAGTGGAGGGCATCCTTGATGCATTTAAGGACATTCAGCCAGTTGAGCTTTTTGGACAGCTGTTTGTTTCACTACTTGGTTTAGGATTTACAATTGCTGAACCTTTGCTGTCTGGTAACGATGACTTCTCAAAGTTGTTCAATGACTGCAAGGAGTTTGTAGTTACCACTTGTCAAAGTATCAGATTCGGTGAGAAAATTGATGAACTTGTTCAGGTATATGAAACAGTGGAGACACTGTTGCAGAATCCTGAGGAGGCATTGAAGTTGATGAAGCATTCAGAAGAATCAACTGTGACTACCGGTGAAACAAAGCGCCGGTTCAAGAAGCTCAGCCATATCTTTGCTGGCAAAGATAAACTGTTGTCAAGGTCTTTTCGGAAAGACCAAATCAACGATGAAGAAAAAGGGAGTCGACAATCTTTTTCAAGTTTCTTTGACAGGAAGTCATCTTTATTCTCAAAGAAGCCTCCCAAACGTGGAAACTTGGCCGCTGCTGAGACAACTCACTCTCTGGAAGATGATTGGACAATAATTTAA 2220 0.4167 MFVLLCISWTCSYSFSYTINTCMFLIFFSYILCSAMELHVGNSFVSKARTVLHSAAVKAERVLNDFKSDLAGEDFDKHLREDDGMQRNQEDDYAKDENESKFLVELKQIKWRPRHFGTKQHWKDRINNIRKGRKESEDTDKVEDASMDVIPLFDEMCVLHVENDLDAKGSEAFSSVEGLTVAARRLIPPSSVLKQLAIAVEAGMKANSMKNFAASTEGSSPSIEKAGLRLSAVKALVLREKEDKLTSEFTSKEKFVYLISSLFNPEGYFLRRKINSNQEEIEIPSLIRDIHGAPPESLVVKLAEVIGNLKTLREMEIFWCRVIAEIRKLWSEEKHLPGVPLDDIPDLKSCLLNQQFQVINCCISRKRRHIIASESLDYMLMEANSNNTPESTNCCDGTSASRLLYARLSTGELVLRLGAHCPSGNLTLLETGEPAYSPITQEAPLLTEDLIKETEELILQTGSFGAGCSQLLSDMQAFKAANPGCILEDFVRWYSPPDWTEIEASTEDSCSSDGSGSDSSSNRGHLSRRMRKEGNLWRELWETSKPVPAVKQAPLFDEDLTVEGILDAFKDIQPVELFGQLFVSLLGLGFTIAEPLLSGNDDFSKLFNDCKEFVVTTCQSIRFGEKIDELVQVYETVETLLQNPEEALKLMKHSEESTVTTGETKRRFKKLSHIFAGKDKLLSRSFRKDQINDEEKGSRQSFSSFFDRKSSLFSKKPPKRGNLAAAETTHSLEDDWTII* 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr3g1315 739 MobiDBLite consensus disorder prediction 504 529 - -
Mtr3g1315 739 MobiDBLite consensus disorder prediction 504 523 - -
Mtr3g1315 739 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 41 739 - -
Mtr3g1315 739 Pfam Rab3 GTPase-activating protein catalytic subunit 416 569 IPR026147 -
Mtr3g1315 739 PANTHER RAB3 GTPASE-ACTIVATING PROTEIN CATALYTIC SUBUNIT 41 739 IPR045700 GO:0005096|GO:0043547
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr3g1315 Mtr-Chr3 24125286 24131989 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr3g1315 K18270 - gmx:100800515 941.799
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1315 3 24125286 24131989 Mtr5g3301 5 41884679 41892589 PCT