Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3702 ATGGTTCTAGCGGAATTAGGAGGAAGCATTACTCGTGCTCTTCACAAAATGAACAACACAACAGTGATCGACGAGAAAGCTCTCACTGATTGTCTCAATGAGATCAATCGAGCTCTCCTTCAATCCGATGTTCGTTTCGAGCTTATTCGAGACATGCAGATTAATATCAAGAACATTGTTAATCTCGAACAACTCGCCGCCGGTCATAACAAACGCAAGATTATCCAACAAGCTGTGTTTGACGAACTCTGCAGAATGTTGAATCCTGGAAAACCATCTTTTGTTCCCAAAAGAGAAAAAACAAGTGTTGTTATGTTTGTTGGTTTACAAGGTTCTGGAAAAACTACAACATGTACAAAATATGCGCATTGTTATCAGAAGAAAGGATGGAAGCCAGCTTTAGTGTGTGCAGATACATTTAGAGCTGGTGCATTTGATCAATTGAAGCAAAATGCTACTAAAGCTAAGATCCCTTTTTATGGAAGCTATATGGAGTCAGATCCTGTCAAAATTGCTGTGGAAGGTGTGGAAAGATTCAAGGAAGAAGACCATGATCTTATAATTGTTGATACCAGTGGGCGGCACAAACAAGAAGCATCCCTTTTTGAAGAAATGCGCCAACTTTCGGAAGCTACGAAACCAGATCTTGTTATATTTGTTATGGATAGCAGTATTGGTCAGGCTGCTTTTAATCAGGCCCAAGCATTCAAACAGATTGTTGCTGTTGGAGCTGTAATTATCACCAAAATGGATGGCCATGCCAAGGGTGGTGGTTCTCTTAGCGCTGTTGCAGCAACAAAGAGTCCTGTCATATTCATAGGAACTGGTGAACATATGGATCAGTTTGAAGTATTTGAAGTTCAGCCGTTTGTTAGTCGTCTATTAGGCATGGGGGACTTGTCTGGGTTAATAGACAAAATTCATGGAGTTGTTCCAATGGATCAACAGGCTGATCTTGTTCAAAAACTGTCAAAAGGAAACTTCACCTTGAGGATTATGTATGAGCAATTTCAGAACGCCCTTAAAATGGGTCCTATGGGCGAGTTAGTTTCAATGATTCCGGGATTTAGTTCTGAGTTAATACCACAAGGCCATGAGAATGAAAGCTCGGCAAAACTTAAGCATTATATGACAATGATGGATTCAATGACAAATGAAGAGTTGGATAGTTCAAACCCAAAGCTCATTAACGAATCACGTATGATGCGAATAGCTCGAGGTTCTGGTCGTCTAGTTAGGGAAGTGTTGGAGTTGATGGAAGTGTACAAGCGTATTGCAAAGGAGTTCAGTAAGATATCTCGATGTAGGAATCCACAGGACATGGTCAAATCATTCCCCCCACATTTGCTGAAGCAATTTGGTGGCGTCAAAGGGTTACAAGACATGATGGGAATGTTTGGTGGTGGTAGATAG 1413 0.4098 MVLAELGGSITRALHKMNNTTVIDEKALTDCLNEINRALLQSDVRFELIRDMQINIKNIVNLEQLAAGHNKRKIIQQAVFDELCRMLNPGKPSFVPKREKTSVVMFVGLQGSGKTTTCTKYAHCYQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFKEEDHDLIIVDTSGRHKQEASLFEEMRQLSEATKPDLVIFVMDSSIGQAAFNQAQAFKQIVAVGAVIITKMDGHAKGGGSLSAVAATKSPVIFIGTGEHMDQFEVFEVQPFVSRLLGMGDLSGLIDKIHGVVPMDQQADLVQKLSKGNFTLRIMYEQFQNALKMGPMGELVSMIPGFSSELIPQGHENESSAKLKHYMTMMDSMTNEELDSSNPKLINESRMMRIARGSGRLVREVLELMEVYKRIAKEFSKISRCRNPQDMVKSFPPHLLKQFGGVKGLQDMMGMFGGGR* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3702 470 Pfam Signal peptide binding domain 327 427 IPR004125 GO:0006614|GO:0008312|GO:0048500
Mtr2g3702 470 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 298 IPR027417 -
Mtr2g3702 470 SMART SRP54_3 101 296 IPR000897 GO:0005525|GO:0006614
Mtr2g3702 470 PANTHER SIGNAL RECOGNITION PARTICLE 54 KDA PROTEIN 1 467 - -
Mtr2g3702 470 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 269 282 IPR000897 GO:0005525|GO:0006614
Mtr2g3702 470 Pfam SRP54-type protein, helical bundle domain 6 83 IPR013822 GO:0005525|GO:0006614
Mtr2g3702 470 Gene3D - 91 285 IPR027417 -
Mtr2g3702 470 CDD SRP54_G 102 294 - -
Mtr2g3702 470 SMART SRP54_N_2 2 87 IPR013822 GO:0005525|GO:0006614
Mtr2g3702 470 Gene3D - 310 446 IPR036891 GO:0006614|GO:0008312|GO:0048500
Mtr2g3702 470 Gene3D - 5 306 IPR042101 -
Mtr2g3702 470 TIGRFAM SRP54_euk: signal recognition particle protein SRP54 2 427 IPR006325 GO:0003924|GO:0005525|GO:0006614|GO:0008312|GO:0048500
Mtr2g3702 470 Hamap Signal recognition particle 54 kDa protein [srp54]. 6 463 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Mtr2g3702 470 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 1 94 IPR036225 -
Mtr2g3702 470 Pfam SRP54-type protein, GTPase domain 102 296 IPR000897 GO:0005525|GO:0006614
Mtr2g3702 470 PANTHER SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54 1 467 IPR022941 GO:0003924|GO:0005525|GO:0006614|GO:0048500
Mtr2g3702 470 SUPERFAMILY Signal peptide-binding domain 298 432 IPR036891 GO:0006614|GO:0008312|GO:0048500
Mtr2g3702 470 SMART AAA_5 100 277 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3702 Mtr-Chr2 51082672 51088582 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3702 K03106 - pop:7487461 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3702 2 51082672 51088582 Mtr2g3702 2 51082672 51088582 ECH
Mtr2g3702 2 51082672 51088582 Mtr4g0195 4 2340642 2346799 PCT