Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3638 ATGAAGAAACAATGTTTCACAGAACCAGAAACAAGTCCAAACCAACAAGTAACTTTGGAATATTGTTGCTGGTTCGAAGATGCATGCATCCTTGACATGGATTGCTTCATTAAGACCCTTTCAAACATCAAACAAAAAGGTGTTCGTTCCGATTTAATCGGTTCCATCATCACTCACTATGCTTCCAAATGGCTCCCTGACCTTGAATCTTCAAATTCAAATTCAAATGCAAATGCAAATTCACCTGAAAGTGTAACAACATCATGGATGAAGAAAAGGTTCTTTGTTGAAACCTTAGTCAGTGTTCTTCCACCAGACAAAGATTCCATTCCATGCAACTTCCTCCTTCGCCTTCTTAAAACAGCAAACATGGTTCTTGTCGAGTCTACTTATCGAACCGATCTTGAGAATCGAATTTCATGGCAGTTAGATCAAGCTTCATTGAAAGAACTCATGATACCTTCTTTCAGTCATACTTGTGGGACCCTTTTGGATGTTGAGCTTGTTATTAGGTTGGTTAAGAGGTTTATTAGTTTAGATCATGATGGAGTTAAAACTGGTGCTGCTTTGGTTAAGGTTGCTAAATTGGTTGATTGTTACCTTGCTGAAGCTGGTTTGGATGCTAATTTGAGTTTGTCTCAGTTTGTTGCACTTGCTGGTGCTCTTCCTAATCATGCAAGAGCTACTGATGATGGTTTATATAGAGCCATTGACACTTATCTTAAAGCACATCCAAGCGTGTCGAAGCAAGAAAGAAAAAGTCTGTGTAGGTTGATTGATAGCAGGAAACTCACACCAGAAGCCTCACTTCATGCAGCTCAAAACGAACGGTTGCCTGTGAGAGCTGTTATTCAAGTTCTCTTCTCCGAACAAACGAAACTCAACCGTCACGTTGATTGGAGTGCTTCTTTCAGTAGCTTGAGGAGTCCAAGTGGATACGGTGGTGTGTTGGACCCACAAGCACGGTGTCTTTCTAAGCGCGAAATGAACACACAACAAATGGAGATAAAAAAACTGAAGGAAGATGTTTACAGGCTGCAGAGTCAGTGCAATGTCATGCAAGCACAGATGGACAAGATGGCTGAGAAGAAGAAAAGTTTCTTCAAATGGAAGAAACTTGCTTTTAGTAAAAGCATCGGAGAGATGGAGAATGTTGAACAAGATGAAGCTGAAACTGAATTTGGATTTGGAAGGCAAACACCTATGGACATGAAAACTAGTACTGTGGTCAAAAGTAGGACTCCTCATAAGTGGAGAAAATCTATGTCCTGA 1272 0.4041 MKKQCFTEPETSPNQQVTLEYCCWFEDACILDMDCFIKTLSNIKQKGVRSDLIGSIITHYASKWLPDLESSNSNSNANANSPESVTTSWMKKRFFVETLVSVLPPDKDSIPCNFLLRLLKTANMVLVESTYRTDLENRISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFISLDHDGVKTGAALVKVAKLVDCYLAEAGLDANLSLSQFVALAGALPNHARATDDGLYRAIDTYLKAHPSVSKQERKSLCRLIDSRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLNRHVDWSASFSSLRSPSGYGGVLDPQARCLSKREMNTQQMEIKKLKEDVYRLQSQCNVMQAQMDKMAEKKKSFFKWKKLAFSKSIGEMENVEQDEAETEFGFGRQTPMDMKTSTVVKSRTPHKWRKSMS* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3638 423 PANTHER PHOTOTROPIC-RESPONSIVE NPH3 FAMILY PROTEIN 21 423 - -
Mtr2g3638 423 Coils Coil 329 356 - -
Mtr2g3638 423 PANTHER OS12G0117600 PROTEIN 21 423 IPR043454 -
Mtr2g3638 423 Pfam NPH3 family 23 269 IPR027356 -
Mtr2g3638 423 ProSiteProfiles NPH3 domain profile. 22 293 IPR027356 -
Mtr2g3638 423 MobiDBLite consensus disorder prediction 390 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3638 Mtr-Chr2 50377381 50380081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3638 24 359 EF-hand Containing Proteins AT3G44820 31.818 4.39e-51 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3638 - - gmx:100777820 620.928
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3638 2 50377381 50380081 Mtr2g3638 2 50377381 50380081 ECH
Mtr2g3638 2 50377381 50380081 Mtr4g0249 4 2981347 2984652 PCT