Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3536 ATGAAACTCCTCAGAACAATCTTCATCCACCACAAAAACCACCATTTCCTCAACCCCAAACGTGTCTTTTCATCTCTACTTTCACCAAACCCTTCTTCAACAACAACACCAGAAGACACAGAAACCCTACATTCCAATGAAAAACCCCAAAAACCAACCAATACTTGGAGTATGTACGGTAACGTCATTGCAACTAAACAGAAAATCAACAATCACAACGAGGACGACGAAACCAAGGAAGAAAAACCAACTGAAAGTGAAAATGGAAGCATGATGAATTTGAAGAACAAAACTATTTTTAAAACGGCGGCAACCACGGTGACAGTGGACAAAAGAAGTACTAAAAAGGTGAAGACTCAGTGGGTTTGTTGTAACTGTGGGTATACTGCAGGACAATGGTGGGGTACTTGTCCTTCTTGTACTATGGTTGGAACAATGAAGGAGTTTCATGAAGCTAAACTTGGTGATGGTATTGATAGTAATAAGGTTAGAACTGGTTTATCTGTTTCTGAAGATGTAATGGGAGCTTGGCTTCCACAGAGAGGTGATCAATTGCATCCTGTTAAATTGAGCGAGGTTAATCGTGGGTTCGACGAAAAGGGTTGGAGATTTCCTTTGTCTGGCCCTTTTGGAGATGAAGTTTCTATTGTGCTTGGCGGTGGTCTTGTGCCAGGGTCTTTGAATTTAGTTAGTGGTGATCCCGGTGTTGGGAAGAGTACACTGTTGTTGCAGATGGCAGCATTGATAGCAGACGGATGCAATGACAGTGATGGTGAGGCTCTTCCAGTTGTATATGTCTCTGGTGAAGAGAGCCTTCAGCAAATTGGTCACAGAGCAGGCCGCCTTGGAATTAATTCTGATATTTATTTGTATTCAAGTACTGATATTGAGGACATAATAAGGATAGCTCAGTCTTTCCCCATTAGAGCCCTGGTTGTTGATTCAATACAGACTGTTTATTTGAAAGGAATAGCAGGAAGTGCTGGAGGGATTGTGCAGGTGAAAGAATGTACTTCAGCTTTGATGCGATTTGCTAAAACGACTAACATCCCCGTACTTTTGATTGGACACGTGACAAAATCTGGAGACATAGCCGGGCCTCGTGTTCTGGAGCATATTGTTGATGTCGTCTTGTACTTGGAAGGTGAGAGGTTCACTTCATATCGAATGCTCCGTGCTGTGAAAAATCGGTTTGGATCCACTGATGAGCTTGGAGTTTTTGAGATGTCAGAATCAGGATTTAAGGCAGTTTCCAATGCAACTGAAATGTTTCTCACTGAACAAGACGCTGATTCAGATGTTTTAGTTGGGTTAGCTTTTACCGTAATAATGGATGGTTCAAGAACTTTCATAATTGAAGTTCAGGCACTCTGCCTTTCACAATCCCCGGTAGGAGGATCAACTTCAAGAGTAGTTAATGGAATTGACACAGATAGAGCTAACATGATCAAATGTGTTCTTATAAAGCAAGCAGGTCTTCATATCCCAGTAAACTCTGTGCATTTGAATGTTGTTAGTGGATTGAAAATGACCGAAACTGCTGGAGATCTTGCAATAGCAGCTGCAATCTGCAGCAGCTTCTTGGAGTACCCTATTCCAAAGGGCATTGCATTCATTGGTGAAATTGGCCTTAGCGGTGAGCTTCGCACGGTTCCTAGAATCGACAAAAGAGTGCACGCATTGGCAAAGTTGGGTTACAAAACATGTGTAGTACCAAAACAAGCTCTAAAAGCTTTAGGAACTGAAGGTCTAGAAAATATTAAAGTAGTAGGTTGCAAGAATCTGAAGGAGTTTATTAACGCAGTATTCAGTAGATAA 1818 0.4164 MKLLRTIFIHHKNHHFLNPKRVFSSLLSPNPSSTTTPEDTETLHSNEKPQKPTNTWSMYGNVIATKQKINNHNEDDETKEEKPTESENGSMMNLKNKTIFKTAATTVTVDKRSTKKVKTQWVCCNCGYTAGQWWGTCPSCTMVGTMKEFHEAKLGDGIDSNKVRTGLSVSEDVMGAWLPQRGDQLHPVKLSEVNRGFDEKGWRFPLSGPFGDEVSIVLGGGLVPGSLNLVSGDPGVGKSTLLLQMAALIADGCNDSDGEALPVVYVSGEESLQQIGHRAGRLGINSDIYLYSSTDIEDIIRIAQSFPIRALVVDSIQTVYLKGIAGSAGGIVQVKECTSALMRFAKTTNIPVLLIGHVTKSGDIAGPRVLEHIVDVVLYLEGERFTSYRMLRAVKNRFGSTDELGVFEMSESGFKAVSNATEMFLTEQDADSDVLVGLAFTVIMDGSRTFIIEVQALCLSQSPVGGSTSRVVNGIDTDRANMIKCVLIKQAGLHIPVNSVHLNVVSGLKMTETAGDLAIAAAICSSFLEYPIPKGIAFIGEIGLSGELRTVPRIDKRVHALAKLGYKTCVVPKQALKALGTEGLENIKVVGCKNLKEFINAVFSR* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3536 605 Pfam Subunit ChlI of Mg-chelatase 488 574 - -
Mtr2g3536 605 SUPERFAMILY Ribosomal protein S5 domain 2-like 395 603 IPR020568 -
Mtr2g3536 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 409 IPR027417 -
Mtr2g3536 605 Gene3D - 425 605 IPR014721 -
Mtr2g3536 605 TIGRFAM sms: DNA repair protein RadA 116 597 IPR004504 GO:0003684|GO:0005524|GO:0006281
Mtr2g3536 605 MobiDBLite consensus disorder prediction 69 86 - -
Mtr2g3536 605 ProSiteProfiles RecA family profile 1. 203 358 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Mtr2g3536 605 MobiDBLite consensus disorder prediction 27 56 - -
Mtr2g3536 605 PANTHER DNA REPAIR PROTEIN RADA 1 605 - -
Mtr2g3536 605 Gene3D - 214 415 IPR027417 -
Mtr2g3536 605 MobiDBLite consensus disorder prediction 69 90 - -
Mtr2g3536 605 PRINTS DNA repair protein radA signature 123 147 - -
Mtr2g3536 605 PRINTS DNA repair protein radA signature 216 244 - -
Mtr2g3536 605 PRINTS DNA repair protein radA signature 314 338 - -
Mtr2g3536 605 PRINTS DNA repair protein radA signature 353 381 - -
Mtr2g3536 605 PRINTS DNA repair protein radA signature 388 414 - -
Mtr2g3536 605 PRINTS DNA repair protein radA signature 467 490 - -
Mtr2g3536 605 PANTHER DNA REPAIR-LIKE PROTEINRADA 1 605 - -
Mtr2g3536 605 SMART AAA_5 224 384 IPR003593 -
Mtr2g3536 605 Pfam AAA domain 219 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3536 Mtr-Chr2 49374114 49382981 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3536 K04485 - gmx:100791181 734.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3536 2 49374114 49382981 Mtr2g3536 2 49374114 49382981 ECH
Mtr2g3536 2 49374114 49382981 Mtr8g0402 8 4561614 4569906 PCT