Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3455 ATGAACAACAACAGCAACAACAACAAAGACACTAGTACCATAGGAATCCTTGATTCTCGATTCAACCAAACCCTCAGAAATGTTCAAGGGTTACTCAAGGGTCGTAGCATTCCTGGTAAAATATTATTGACCCAGAGGGTAGATCCGATAGATAATTCGGGCTTATACTCGCCAACTTATCAAAGGAGTTCCTCATATAGTGATACTGGCACGAGCGATCGCGCAACTGAGACAGTAGAGGAGGAAGTTCACAGTGGAAGCAAACCATTTGGTATTACCAACAATAGTAAATTAAAAACATCAACCTCACATGCAGAGAACCCAACTGAAGAAATCCGGAAATCTTCCATAGGTGGTAGGACTACCGATTCTGCAAGAGTTATGAAGTTCACAAAGGTTCTTTCTGGAACCATGGTTATATTAGATAAATTGCGTGAATTAGCTTGGAGTGGTGTTCCAGATTATATGCGTCCTACAGTGTGGAGACTTCTCTTGGGATATGCACCAACTAATTCAGATAGAAGGGAGGGAGTTTTGAGAAGGAAGCGGCTCGAGTATCTTGATTGTGTTTCTCAGTATTATGATATTCCTGATACGGAACGCTCAGACGATGAGATCAGCATGCTTCGCCAGATTGCCGTTGATTGTCCAAGAACTGTACCTGATGTTGCATTCTTCCAGCAACCACAAGTTCAGAAATCACTGGAGCGTATTCTTTATGCATGGGCCATTCGGCATCCAGCAAGTGGATATGTTCAGGGGATAAATGATCTTGTCACGCCATTTTTTGTTGTTTTCCTATCAGAATATTTAGAAGGGAGCATAAATAACTGGACAATGTCCGATTTATCTTCAGATAAAATCTCTAATGTAGAGGCTGACTGCTATTGGTGCTTGTCAAAATTGCTTGATGGTATGCAAGACCATTATACATTTGCTCAACCAGGAATTCAAAGGCTTGTCTTTAAGTTGAAGGAATTGGTCAGGAGGATTGATGATCCTGTTTCAAGCCATATGGAGAATCAGGGACTGGAATTTCTTCAATTTGCTTTCCGCTGGTTCAACTGTCTTCTAATCCGCGAGATACCCTTCCATCTTGTCACACGCCTTTGGGACACATATCTAGCCGAAGGAGATGCCTTACCAGACTTCCTTGTGTATATATTTGCTAGTTTTCTTCTTACGTGGTCAGACGAAGTTCAGAAGCTTGATTTTCAAGAGTTAGTAATGTTCCTTCAACACCTTCCAACTCAGAACTGGACTGATCAGGAACTCGAGATGGTACTCTCTCGTGCATTTATGTGGCACAGCATGTTTAACAACTCTCCTAGCCATTTAGCTGCCTAA 1347 0.4187 MNNNSNNNKDTSTIGILDSRFNQTLRNVQGLLKGRSIPGKILLTQRVDPIDNSGLYSPTYQRSSSYSDTGTSDRATETVEEEVHSGSKPFGITNNSKLKTSTSHAENPTEEIRKSSIGGRTTDSARVMKFTKVLSGTMVILDKLRELAWSGVPDYMRPTVWRLLLGYAPTNSDRREGVLRRKRLEYLDCVSQYYDIPDTERSDDEISMLRQIAVDCPRTVPDVAFFQQPQVQKSLERILYAWAIRHPASGYVQGINDLVTPFFVVFLSEYLEGSINNWTMSDLSSDKISNVEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKELVRRIDDPVSSHMENQGLEFLQFAFRWFNCLLIREIPFHLVTRLWDTYLAEGDALPDFLVYIFASFLLTWSDEVQKLDFQELVMFLQHLPTQNWTDQELEMVLSRAFMWHSMFNNSPSHLAA* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3455 448 MobiDBLite consensus disorder prediction 52 73 - -
Mtr2g3455 448 SMART tbc_4 148 404 IPR000195 -
Mtr2g3455 448 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 128 338 IPR035969 -
Mtr2g3455 448 ProSiteProfiles TBC/rab GAP domain profile. 151 378 IPR000195 -
Mtr2g3455 448 Gene3D - 128 179 - -
Mtr2g3455 448 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 2 445 - -
Mtr2g3455 448 MobiDBLite consensus disorder prediction 88 103 - -
Mtr2g3455 448 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 314 436 IPR035969 -
Mtr2g3455 448 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 187 312 - -
Mtr2g3455 448 Pfam Rab-GTPase-TBC domain 155 397 IPR000195 -
Mtr2g3455 448 MobiDBLite consensus disorder prediction 52 119 - -
Mtr2g3455 448 Gene3D - 313 448 - -
Mtr2g3455 448 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 2 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3455 Mtr-Chr2 48713497 48719185 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3455 K20360 - gmx:100776049 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3455 2 48713497 48719185 Mtr2g3455 2 48713497 48719185 ECH
Mtr2g3455 2 48713497 48719185 Mtr4g2016 4 33700668 33706317 PCT