Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3433 ATGCCAACTATTTTGCTTAGAATTTTCCTTTTATACAACGTTGTCAATTCATTTCTCATTAGTCTTGTTCCTAAGAAACTTATAACCTTCTTCCCTCATTCTTGGTTCACTCATCAAACCTTAACCACACCTTCTTCCACATCAAAAAGAGGTCTTGTTTTTACCAAGACAATAACAATGGATCCAAATGAGCTCAAACGTGTTTTCCAAATGTTTGACCGCAACGACGATGGCCGTATAACAAAGAAAGAGTTGAATGATTCCTTGGAGAATTTAGGAATCTTCATCCCTGACAAAGAGCTGAGTCAAATGATCGAGAAGATTGATGTGAACCGAGATGGGTGTGTGGACATAGAGGAATTTAGAGAGTTGTATGAGTCAATTATGAGTGAACGTGATGAAGAGGAGGAAGAAGATATGAGGGAAGCATTCAACGTGTTTGATCAGAATGGTGATGGATTCATTAGCGTTGATGAGTTGAGATCGGTTTTGGTTTCGTTGGGATTGAAACAAGGAAGAACAGTTGAAGATTGTAAGAAGATGATAGGAACTGTTGATGTTGATGGAAATGGTTTGGTTGATTATAAGGAGTTTAAGCAAATGATGAAGGGTGGTGGATTCACTGCTCTCAGTTAG 636 0.3836 MPTILLRIFLLYNVVNSFLISLVPKKLITFFPHSWFTHQTLTTPSSTSKRGLVFTKTITMDPNELKRVFQMFDRNDDGRITKKELNDSLENLGIFIPDKELSQMIEKIDVNRDGCVDIEEFRELYESIMSERDEEEEEDMREAFNVFDQNGDGFISVDELRSVLVSLGLKQGRTVEDCKKMIGTVDVDGNGLVDYKEFKQMMKGGGFTALS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3433 211 ProSiteProfiles EF-hand calcium-binding domain profile. 96 131 IPR002048 GO:0005509
Mtr2g3433 211 ProSitePatterns EF-hand calcium-binding domain. 186 198 IPR018247 -
Mtr2g3433 211 Coils Coil 118 138 - -
Mtr2g3433 211 Gene3D - 59 130 - -
Mtr2g3433 211 CDD EFh 64 124 IPR002048 GO:0005509
Mtr2g3433 211 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 6 209 - -
Mtr2g3433 211 CDD EFh 143 203 IPR002048 GO:0005509
Mtr2g3433 211 ProSitePatterns EF-hand calcium-binding domain. 109 121 IPR018247 -
Mtr2g3433 211 Gene3D - 131 205 - -
Mtr2g3433 211 ProSitePatterns EF-hand calcium-binding domain. 148 160 IPR018247 -
Mtr2g3433 211 ProSiteProfiles EF-hand calcium-binding domain profile. 173 208 IPR002048 GO:0005509
Mtr2g3433 211 ProSiteProfiles EF-hand calcium-binding domain profile. 60 95 IPR002048 GO:0005509
Mtr2g3433 211 Pfam EF-hand domain pair 64 126 IPR002048 GO:0005509
Mtr2g3433 211 Pfam EF-hand domain pair 137 203 IPR002048 GO:0005509
Mtr2g3433 211 ProSitePatterns EF-hand calcium-binding domain. 73 85 IPR018247 -
Mtr2g3433 211 SMART efh_1 64 92 IPR002048 GO:0005509
Mtr2g3433 211 SMART efh_1 177 205 IPR002048 GO:0005509
Mtr2g3433 211 SMART efh_1 139 167 IPR002048 GO:0005509
Mtr2g3433 211 SMART efh_1 100 128 IPR002048 GO:0005509
Mtr2g3433 211 ProSiteProfiles EF-hand calcium-binding domain profile. 135 170 IPR002048 GO:0005509
Mtr2g3433 211 SUPERFAMILY EF-hand 63 204 IPR011992 -
Mtr2g3433 211 PANTHER BNAA04G25000D PROTEIN 6 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3433 Mtr-Chr2 48446517 48447875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3433 5 209 EF-hand Containing Proteins AT2G43290 64.319 2.09e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3433 K13448 - gmx:100527487 305.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3433 2 48446517 48447875 Mtr2g3433 2 48446517 48447875 ECH
Mtr2g3433 2 48446517 48447875 Mtr4g1997 4 33536413 33537443 PCT