Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3311 ATGGAGTTTCTTACTTTACTTTTTATTTTTACAACAATGCACCTGTGTTTCCTGATCTGGAAAAAATTTGATCAGAGAAGGGACCAAGAGTGTTACATATTAAACTATCAATGTTACAAGCCAAGTGATGAAAGAAAACTTGGAAGTGTACAATGTGGCAAGATTATAGGAAACAATGAGAGTATTGGTCTTGATGAGTGCAAGTTCTTCCTCAAAGCTGTTGTCAACTCAGGCATTGGTGAGGAAACTTATGCTCCAAGAAACTTCATCGAAGGCCGAACTGTGAACCCTACGTTGGAAGACGGAGTGGAGGAGATGGAAGAGTTTTGTAATGATAGCATTACAAAGCTTCTAAATAAATCAGGCATTTCACCTTCGGAGATCGATATTCTTGTGGTAAATGTATCTTTATTCTCTTCTGTTCCTTCTTTAACTTCAAGAATCATTAACCATTACAAAATGAGAGAGGATATAAAAGCTTATAACCTATCTGGTATGGGTTGTAGTGCTAGTCTAATCTCATTAGACGTTATTCAAAACATTTTCAAGTCAGAAAAGAACAAGTATGCTCTTTTGTTAACATCAGAGTCTCTTAGTACAAATTGGTATTCAGGAATCAATAGGTCAATGATTCTTGCAAATTGTCTTTTCCGTACCGGCGGTTGTGCAATTCTTCTCACAAATAAAAGATCCTTAAAACACAAAGCTATACTGAAGTTGAAGTGTTTAGTTAGAACTCATCATGGTGCTAGGGATGATGCTCATAACTGTTGTAGTCAAAAAGAAGATGAACAAGGTAAACTTGGTTTTTACCTAGCTAAAGATCTTCCAAAAGCAGCTACAAGAGCTTTTACAGATAATTTAAGGGTGTTATCACCTAAAATTTTACCAGCTAGGGAATTACTTAGGTATATGTTAATGTCACTCATAAAAAAAGTGATAAAATATTTTGCTCCTAAGTCAGCAGCAAGATGGTTTGGAACAAGTAGCAAATCACCAGTGAATTTCAAAACTGGTGTTGATCATTTTGTGCTCCACACTGGAGGAAAAGCAGTGATAGATGGAATTGGGATGAGTTTAGATCTGAATGATTATGACCTAGAACCAGCAAGAATGTCATTACATAGATTTGGTAACACATCAGCAAGTAGTTTGTGGTATGTGTTGGGGTATATGGAAGCTAAGAAGAGGTTGAAAAAAGGTGAGAGAGTATTGATGATAAGTTTAGGTGCTGGCTTTAAATGCAACAGTTGTTATTGGGAAGTAATGAGAGATGTTGTTGTTGGTGATGATAGAAATAATGTGTGGGACGATTGCATTGATTACTATCCACCACACTCTTTGGCCAACCCATTCATGGAGAAGTACGGTTGGATTAACAATATTCAAGATCCAAGCACTTTCAAACTCAAACTTGCTGAGTTTCTTCTCACTCTTAAGTGA 1443 0.3638 MEFLTLLFIFTTMHLCFLIWKKFDQRRDQECYILNYQCYKPSDERKLGSVQCGKIIGNNESIGLDECKFFLKAVVNSGIGEETYAPRNFIEGRTVNPTLEDGVEEMEEFCNDSITKLLNKSGISPSEIDILVVNVSLFSSVPSLTSRIINHYKMREDIKAYNLSGMGCSASLISLDVIQNIFKSEKNKYALLLTSESLSTNWYSGINRSMILANCLFRTGGCAILLTNKRSLKHKAILKLKCLVRTHHGARDDAHNCCSQKEDEQGKLGFYLAKDLPKAATRAFTDNLRVLSPKILPARELLRYMLMSLIKKVIKYFAPKSAARWFGTSSKSPVNFKTGVDHFVLHTGGKAVIDGIGMSLDLNDYDLEPARMSLHRFGNTSASSLWYVLGYMEAKKRLKKGERVLMISLGAGFKCNSCYWEVMRDVVVGDDRNNVWDDCIDYYPPHSLANPFMEKYGWINNIQDPSTFKLKLAEFLLTLK* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3311 480 PANTHER 3-KETOACYL-COA SYNTHASE 1 465 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mtr2g3311 480 PANTHER 3-KETOACYL-COA SYNTHASE 1 465 - -
Mtr2g3311 480 Pfam FAE1/Type III polyketide synthase-like protein 25 312 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mtr2g3311 480 SUPERFAMILY Thiolase-like 243 423 IPR016039 GO:0016746
Mtr2g3311 480 PIRSF Very_long_ch_3-ktacl-CoA_syn 1 458 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mtr2g3311 480 SUPERFAMILY Thiolase-like 18 231 IPR016039 GO:0016746
Mtr2g3311 480 Gene3D - 68 421 IPR016039 GO:0016746
Mtr2g3311 480 CDD CHS_like 19 420 - -
Mtr2g3311 480 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 340 421 IPR013747 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3311 Mtr-Chr2 47184574 47186991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g3311 19 473 Acyl Lipid Metabolism Gene Families AT2G28630 66.083 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3311 K15397 - gmx:100790992 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3311 2 47184574 47186991 Mtr2g3311 2 47184574 47186991 ECH
Mtr2g3311 2 47184574 47186991 Mtr4g1818 4 31241262 31243069 ECH
Mtr2g3311 2 47184574 47186991 Mtr4g1818 4 31241262 31243069 PCT