Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g3246 ATGTACAAGAACCAGCTTCAAGAGCTGGCGCAGAGAAGCTGCTTCAATCTTCCTTCTTACACTTGCATTCGTGAAGGTCCTGATCACGCGCCGAGGTTTAAAGCTACCGTTAACTTTAACGGCGAGATCTTCGAAAGTCCTCACTACTGTTCAACTCTCCGTCAAGCTGAACACTCCGCCGCTGAAGTTGCGCTTAATTCGCTTTCTCACCGTGGTCCTTCTCACTCTCTCGCCGCTAAGATCCTCGATGAGACTGGAGTCTACAAGAACCTCTTGCAAGAAATTGCACAGCGAGTAGGGGCTCCATTGCCTCAGTACACAACGTACAGATCGGGCCTTGGACATTTACCTGTTTTTACTGGGATAGTAGAATTGGCTGGAATCACATTTACTGGTGAACCTGCGAAGAATAAGAAACAAGCCGAGAAAAATGCTGCTATGGCAGCTTGGTCATCTTTAAAGCAATTGGCAAAAGAGACTGCTAGCTCTTCAACTGAACCGGAGAACAATGACGAATTAGAACAGATCACTATAGCACGGGCTTTGTTGAACTACCGTCTGAAGGAAAAGATGTCAATGTCTAATCCAAATGCTCGGATTCCATTTCAGAAGAAGTTTCAGATTCAAAATATCAGACCAACTAGTTCCCAATCTCCTGCCACCACATCAAAGATCCTTCCTCTAATTTGCCAAAAGACAGGACCTCGAAACAGACCTTCATCGGCAACACCAAATGAAAATCCTCGAAGCAGGCATCCGCAAGCCGCAGCAACCAGTGACAAGTCCATTTTGCAGCAGCCACAATCTTCTGCAATAGAAAGCCGGGTGACCCGTCCTCTGAGGTTCCCTGCAGCAGGAGCACCCCCTTATGTTCCTATTCGACAAATGAGACCTTGCCATGGGATTGCACCTGCAGTGTCTGTTAGGACTGTAATACCTGTGTTCTCTGCACCACCTCTTCCACCACCTACCTCAGTGCATCAGATAATACGGGCTCCTCCTGTACGAATTGCTCCTCCAGTCAGTATTCGGCAAGCTGTTCCTGTATTTGCTGCCCCACCACTAAGAAAAGATGAACCTGCCCCCATCCAAAAAGATCTACCTGCCAGTAGTACCCCTGTCGAGCAAGATAAGCTTCCAGCTAAAATTCTTGAGATGGACAAGACTGAGAACAATTCACCACCACAACCAGAGACTCTGCAGAGTTTGGAGCAGTTGAAAATTTGA 1227 0.4727 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSAAEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFTGIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIARALLNYRLKEKMSMSNPNARIPFQKKFQIQNIRPTSSQSPATTSKILPLICQKTGPRNRPSSATPNENPRSRHPQAAATSDKSILQQPQSSAIESRVTRPLRFPAAGAPPYVPIRQMRPCHGIAPAVSVRTVIPVFSAPPLPPPTSVHQIIRAPPVRIAPPVSIRQAVPVFAAPPLRKDEPAPIQKDLPASSTPVEQDKLPAKILEMDKTENNSPPQPETLQSLEQLKI* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g3246 408 PANTHER DOUBLE-STRANDED RNA-BINDING PROTEIN 2 1 408 - -
Mtr2g3246 408 SUPERFAMILY dsRNA-binding domain-like 2 68 - -
Mtr2g3246 408 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 87 155 IPR014720 -
Mtr2g3246 408 MobiDBLite consensus disorder prediction 204 275 - -
Mtr2g3246 408 Gene3D - 84 155 - -
Mtr2g3246 408 SUPERFAMILY dsRNA-binding domain-like 88 159 - -
Mtr2g3246 408 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1 70 IPR014720 -
Mtr2g3246 408 PANTHER - 1 408 - -
Mtr2g3246 408 MobiDBLite consensus disorder prediction 355 408 - -
Mtr2g3246 408 MobiDBLite consensus disorder prediction 389 408 - -
Mtr2g3246 408 SMART DRBM_3 88 154 IPR014720 -
Mtr2g3246 408 SMART DRBM_3 2 69 IPR014720 -
Mtr2g3246 408 CDD DSRM_AtDRB-like_rpt2 86 154 IPR044451 GO:0003725
Mtr2g3246 408 MobiDBLite consensus disorder prediction 204 277 - -
Mtr2g3246 408 CDD DSRM_AtDRB-like_rpt1 1 69 IPR044450 GO:0003725
Mtr2g3246 408 Pfam Double-stranded RNA binding motif 88 153 IPR014720 -
Mtr2g3246 408 Pfam Double-stranded RNA binding motif 2 68 IPR014720 -
Mtr2g3246 408 Gene3D - 2 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g3246 Mtr-Chr2 46395212 46399479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g3246 - - cam:101510954 692.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3246 2 46395212 46399479 Mtr4g1729 4 29981990 29986116 PCT