Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mtr2g2887 | ATGACAGAAGTTCTCCATTCTCCACCTCATTTTACTTCATCACAAAGAACAACACCTTCAACTTCAACTTCTTCTTCTCCTCTCTCTTCATTCTCTTGCCATGCCATTTTTCAACCTCCTTCACAACCACATTTTCCACTTTTTGAGCTACTAGTAACTCTTTTCAGAAAATCATTATTTCCTTTTAAGAGTAGTGGCAACAAAGACCTTTGCAACATGGACATAAGTCCTCCAACTAACGTGCGCCATGTCGCTCACGTTACTTTTGATAGGTTCAATGGTTTCTTGGGTTTGCCTGATGAGTTTGAACCTGATTTTCCCAGAAGGCCTCCTAGTGCTAGTGCAACTGTTTTTGGAGTTTCAACAGAATCCATGCAGTTATCTTATGATTCAAGAGGGAACAGTGTGCCAACAATTCTTCTGTTAATGCAAAGGCATCTGTATGTTCAAGAAGGGTTGCAGGTGGAGGGGATTTTCAGAATTAATGCAGATAATAGTCAAGAGGAACATGTTAGGAATCAATTGAACATGGGATTGGTTCCTGAAGACATTGATGTACATTGTCTGGCAGGACTAATTAAGGCTTGGTTTCGGGAACTTCCTAGCGGCGTTCTAGATTCGTTATCACAAGAGCAGGTAATGCAATGCCAAACTGAGGAAGACTGTATTGAACTAGTGAGACATCTACCTCATGCTGAAGCTGCACTCTTGGATTGGGCCATCAATCTAATGGCTGATGTAGTCGAACACGAAAATCTCAATAAGATGAACGCACGCAACATTGCCATGGTTTTCGCACCAAACATGACTCAGATGGCAGATCCATTCACTGCATTGATGTACGCAGTTCAAGTGATGAATTTCTTGAAGACACTTATATTAAGGACGCTACGAGAAAGAAAGGATTCTGTCGTCGAATCTAATCCAAGATTGAATTTAGAACCTTCTGATGAGAATGGACACCGTAGACTTTTCGAGTCGTTTCAGAAAGAAGATACTGCAGCAGCAGACAATAAAGAGGCTAAAGAAATTTTTGTTTCAGAAAAAACTGTTGTAGAATGTACACCCGAATCACTCGAAAAAAACTCCTCAACTGAAAGAGAATCTGGCAGTTTGATACGCACTTCTGAGAATCCAATTTGCAATGAGGAATTGTATTGTGAGTTTCCACCGAAAAAAAACATGGGGAAAAACAACAAGTCTGGTCAATCAAGTAGTTCAAATGCTAGAAAAGGGTCCAAAAAGACAAGAGGACAACAACCTGTGATCAATGGAAAAGGGTCGGTCGAGAAAAAGGGAATGAGGACTTTGAGCAGCACAGATACAAGATCAGACCGAGTCGAAGCTTGGCGGTGA | 1356 | 0.41 | MTEVLHSPPHFTSSQRTTPSTSTSSSPLSSFSCHAIFQPPSQPHFPLFELLVTLFRKSLFPFKSSGNKDLCNMDISPPTNVRHVAHVTFDRFNGFLGLPDEFEPDFPRRPPSASATVFGVSTESMQLSYDSRGNSVPTILLLMQRHLYVQEGLQVEGIFRINADNSQEEHVRNQLNMGLVPEDIDVHCLAGLIKAWFRELPSGVLDSLSQEQVMQCQTEEDCIELVRHLPHAEAALLDWAINLMADVVEHENLNKMNARNIAMVFAPNMTQMADPFTALMYAVQVMNFLKTLILRTLRERKDSVVESNPRLNLEPSDENGHRRLFESFQKEDTAAADNKEAKEIFVSEKTVVECTPESLEKNSSTERESGSLIRTSENPICNEELYCEFPPKKNMGKNNKSGQSSSSNARKGSKKTRGQQPVINGKGSVEKKGMRTLSSTDTRSDRVEAWR* | 452 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mtr2g2887 | 451 | MobiDBLite | consensus disorder prediction | 436 | 451 | - | - | |
| Mtr2g2887 | 451 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
| Mtr2g2887 | 451 | SUPERFAMILY | GTPase activation domain, GAP | 115 | 294 | IPR008936 | GO:0007165 | |
| Mtr2g2887 | 451 | MobiDBLite | consensus disorder prediction | 389 | 451 | - | - | |
| Mtr2g2887 | 451 | CDD | RhoGAP | 137 | 293 | - | - | |
| Mtr2g2887 | 451 | MobiDBLite | consensus disorder prediction | 396 | 423 | - | - | |
| Mtr2g2887 | 451 | PANTHER | MKIAA1688 PROTEIN | 1 | 451 | IPR044785 | GO:0005096 | |
| Mtr2g2887 | 451 | SMART | RhoGAP_3 | 134 | 297 | IPR000198 | GO:0007165 | |
| Mtr2g2887 | 451 | ProSiteProfiles | CRIB domain profile. | 75 | 88 | IPR000095 | - | |
| Mtr2g2887 | 451 | SMART | PBD_5 | 75 | 109 | IPR000095 | - | |
| Mtr2g2887 | 451 | MobiDBLite | consensus disorder prediction | 355 | 375 | - | - | |
| Mtr2g2887 | 451 | CDD | CRIB | 73 | 113 | - | - | |
| Mtr2g2887 | 451 | Gene3D | CRIB domain | 71 | 104 | IPR036936 | - | |
| Mtr2g2887 | 451 | ProSiteProfiles | Rho GTPase-activating proteins domain profile. | 120 | 305 | IPR000198 | GO:0007165 | |
| Mtr2g2887 | 451 | PANTHER | PAK-BOX/P21-RHO-BINDING DOMAIN RHO GTPASE ACTIVATING PROTEIN | 1 | 451 | - | - | |
| Mtr2g2887 | 451 | Pfam | RhoGAP domain | 137 | 271 | IPR000198 | GO:0007165 | |
| Mtr2g2887 | 451 | Pfam | P21-Rho-binding domain | 74 | 107 | IPR000095 | - | |
| Mtr2g2887 | 451 | Gene3D | Rho GTPase activation protein | 105 | 309 | IPR008936 | GO:0007165 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mtr2g2887 | Mtr-Chr2 | 42493725 | 42497162 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mtr2g2887 | - | K20642 | ccaj:109798318 | 574.704 |
Event-related genes