Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2865 ATGGAATTGGGAAGCATATTGCACTTTCTTGAGGGAAGAACAATTTTAGTCACTGGTGCCACTGGCTTCCTCGCAAAAATTTTTGTTGAAAAGATTTTGAGAGTTCAACCAAATGTGAAGAAACTTTATCTTCTTCTAAGAGCTAAGGATTCTGAATCTGCTGCCCAACGTTTCCGCAATGAGATAATAGGGAAGGACTTGTTTAAATTGCTGAAGGAAAATCAGGGTCCAAAATTCAACTCCTTTGTCTCTGAAAAGTTGACTTTGGTGCCTGGAGACATTTCTAAAGAAGGCTTGAATTTGAAGGAATCCATTCTAGAAGAGGAGATTTGCAATCAAACGGATGTTATAGTTAATTTGGCTGCAACAACGAAATTTGATGAAAGATACGATGTTGCGTTGGGTATAAATACATTAGGAGTCAAGCATGTTTTGAGCTTTGCCAAAAAATGTATTCAACTCAAGGTGCTTGTCCACGTTTCAACAGCTTATGTGTGTGGTGAGAGAGGAGGACTCATACTAGAGGATCCTCATCGCTACGGTGTGTCACTAAATGGAGTTCCAGGACTTGACATTGACATGGAAAAGAAATTAGTGGAGGAGAAATTGAATCAATTTCAGGCACAGGGAACAACTGAACATGATATTGAAGTGGCCATGAAGGACTTAGGTATGGAAAGAGCTACTAAATATGGATGGCCAAACACATATGTGTTTACAAAAGCAATGGGAGAAATGCTTGTAGAAACTTTCAAGGAAAACATGTCTGTTGTTATTGTTCGTCCCACCATTGTTACTAGCACTTTTAGAGAACCTTTCCCTGGATGGGTTGAAGGCTTAAGAACCATAGACAGTATAGTCGTTGCTTATGGTAAAGGAAAATTAACAAGCTTCATGGCGGATCTCGATGCAGTTTTCGACGTGATACCAGCAGACATGGTGGTAAATGCAATTATAGTAGCTATGATGGCTCATGCAAATCAACCTAATGATAATATCATATATCATGTTGGTTCCTCTATTAGAAACCCAATTACGTACCGTACTTTCAGAGACTATAACCTTAGATATTTCACCAAAAAACCATTGATAAACAAGGATGGAAAATCGATTAAGGTTGGCAATATTACTGTGTTTAGCAACATAGCTAGCTTCCGGAGATACATGTTCATATGCTACATGCTTCCTTTAAAGGGACTAGAGGTCGCAAATTCAATTTTGTGTCAATATTTTCAGGGAATATATACTGACCTAAACCGGAAAATCAGTACAGTTATGCGGTTGATTGATCTTTACCTGCCTTACTTGTTCTTCAATGGCATATTTGATGATATGAATACACAAAAGTTGCTATTAGCCGTAAAACAAGAAGGTGTAGAAGTGAATTTGTTTTACTTTGATCCCAAAATTATTGACTGGGAAGATTACTTCATGAATATCCACATCCCTGGTATCTTCAAGTATGCATTAAAGTTTTAA 1479 0.3766 MELGSILHFLEGRTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRAKDSESAAQRFRNEIIGKDLFKLLKENQGPKFNSFVSEKLTLVPGDISKEGLNLKESILEEEICNQTDVIVNLAATTKFDERYDVALGINTLGVKHVLSFAKKCIQLKVLVHVSTAYVCGERGGLILEDPHRYGVSLNGVPGLDIDMEKKLVEEKLNQFQAQGTTEHDIEVAMKDLGMERATKYGWPNTYVFTKAMGEMLVETFKENMSVVIVRPTIVTSTFREPFPGWVEGLRTIDSIVVAYGKGKLTSFMADLDAVFDVIPADMVVNAIIVAMMAHANQPNDNIIYHVGSSIRNPITYRTFRDYNLRYFTKKPLINKDGKSIKVGNITVFSNIASFRRYMFICYMLPLKGLEVANSILCQYFQGIYTDLNRKISTVMRLIDLYLPYLFFNGIFDDMNTQKLLLAVKQEGVEVNLFYFDPKIIDWEDYFMNIHIPGIFKYALKF* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2865 492 Pfam Male sterility protein 17 318 IPR013120 -
Mtr2g2865 492 CDD FAR-N_SDR_e 13 362 - -
Mtr2g2865 492 Gene3D - 8 373 - -
Mtr2g2865 492 Pfam Male sterility protein 393 491 IPR033640 -
Mtr2g2865 492 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 489 IPR026055 GO:0080019
Mtr2g2865 492 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 13 357 IPR036291 -
Mtr2g2865 492 PANTHER FATTY ACYL-COA REDUCTASE 2 489 - -
Mtr2g2865 492 CDD FAR_C 391 490 IPR033640 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2865 Mtr-Chr2 42269827 42275685 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2865 112 488 Acyl Lipid Metabolism Gene Families AT4G33790 61.538 1.67e-175 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2865 K13356 - gmx:100789566 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2865 2 42269827 42275685 Mtr2g2865 2 42269827 42275685 ECH
Mtr2g2865 2 42269827 42275685 Mtr4g1580 4 27576424 27583458 PCT