Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2830 ATGGCGGTTGTTTTTACATTCACCGCCATCTTGTTAACGGCGGCGACGGTGATTGTTTCCGGATCTCCGGCAACTCTAACGTTGGAAAGAGCTTTTCCGACGAACCACGGAATTGAGCTTAGTCAGCTGAAAGCTAGAGATTTGTTAAGGCATCGTAGATTGCAGTCTTCTTCAAACGGTGTTGCTGATTTTGCTGTTCATGGTACCTTTGATCCATTTCAAGTCGGGCTCTATTTTACAAAGGTGCTGTTGGGTACTCCTCCAGTAGAATTTTATGTGCAGATTGACACTGGAAGTGATGTTCTCTGGGTCAGTTGCAGCTCCTGCAATGGTTGTCCGCAGACAAGTGGGTTACAGATTGAGCTCAATTTTTTCGACCCTAGGAGTTCATCAACATCATCGTTAATATCTTGTTCTGACAAAAGGTGCAATAGTGGAATACAATCATCAGATGCAACCTGTTCCGGTCAGACCAACCAGTGCTCTTACACTTTCCAGTATGGAGATGGTAGCGGAACCTCAGGCTATTACGTGTCCGATACGATGCATTTGGATACTATTTTTGAGGGATCTGTGTCTACAAATTCTTCAGCTCCTGTAGTTTTTGGTTGTAGTAACCAGCAGAGTGGAGACTTGACAAAATCTGACAGAGCAGTTGATGGTATATTTGGATTTGGGCAACAGCAAATGTCTGTGATCTCACAGCTCTCATCACAAGGGATTGCTTCTGGAGTATTCTCTCATTGTCTTAGAGGAGATAGCTCTGGTGGAGGAATTCTGGTTCTTGGTGAGATTGTGGAGCCTAACATAGTTTATACTCCACTTGTTCCATCACAGCCTCATTACAACTTAAACCTACAGAGCATATCTGTCAACGGCCAGGCATTGCAAGTCGATCCATCAGTTTTTGCAACATCAAGCAACAGAGGCACCATTGTTGATTCTGGAACAACTTTAGCATACCTTGCAGAAGAGGCTTACGATCCCTTTGTCAATGCGATTACAGCTACCATACCACAATCTGTACGTACGGTTGTTTCCAGGGGAAATCAATGTTTCTTAATCACTGACAGTGTCAGTGACATATTTCCTCAAGTAAGTCTGAACTTTGCTGGTGGTGCATCTATGGTTTTAAGACCACAGGACTACCTTATACAACAGAATTCTATTGGTGGTGCAGCAGTGTGGTGTATTGGCTTTCAAAAAACCCAGGGTCAAGGGGTAACAATTCTAGGAGATCTCGTATTAAAAGACAAAATTGTTGTTTACGATCTGGTCGGTCAACGCATTGGATGGGCTAACTATGACTGTTCTTTGACAGTTAATGTCTCTGCTTCAACTGGCACCGGCAGAAGTGAATTTGTGAATGCTGGAGAGATAGGTGGAAGCAATTCTTTACATGACGGACTTAAGTTGTCAAAGACAGGGTTTATAGCACTCTTTGTAACACTGTTTTGCAGCTTTGGTTTTTTATAG 1476 0.4316 MAVVFTFTAILLTAATVIVSGSPATLTLERAFPTNHGIELSQLKARDLLRHRRLQSSSNGVADFAVHGTFDPFQVGLYFTKVLLGTPPVEFYVQIDTGSDVLWVSCSSCNGCPQTSGLQIELNFFDPRSSSTSSLISCSDKRCNSGIQSSDATCSGQTNQCSYTFQYGDGSGTSGYYVSDTMHLDTIFEGSVSTNSSAPVVFGCSNQQSGDLTKSDRAVDGIFGFGQQQMSVISQLSSQGIASGVFSHCLRGDSSGGGILVLGEIVEPNIVYTPLVPSQPHYNLNLQSISVNGQALQVDPSVFATSSNRGTIVDSGTTLAYLAEEAYDPFVNAITATIPQSVRTVVSRGNQCFLITDSVSDIFPQVSLNFAGGASMVLRPQDYLIQQNSIGGAAVWCIGFQKTQGQGVTILGDLVLKDKIVVYDLVGQRIGWANYDCSLTVNVSASTGTGRSEFVNAGEIGGSNSLHDGLKLSKTGFIALFVTLFCSFGFL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2830 491 Gene3D Acid Proteases 55 264 IPR021109 -
Mtr2g2830 491 CDD pepsin_A_like_plant 78 437 IPR034161 -
Mtr2g2830 491 PANTHER EUKARYOTIC ASPARTYL PROTEASE FAMILY PROTEIN 7 454 - -
Mtr2g2830 491 Gene3D Acid Proteases 265 443 IPR021109 -
Mtr2g2830 491 Pfam Xylanase inhibitor N-terminal 78 263 IPR032861 -
Mtr2g2830 491 SUPERFAMILY Acid proteases 73 440 IPR021109 -
Mtr2g2830 491 ProSiteProfiles Peptidase family A1 domain profile. 78 433 IPR033121 -
Mtr2g2830 491 Pfam Xylanase inhibitor C-terminal 281 433 IPR032799 -
Mtr2g2830 491 PRINTS Pepsin (A1) aspartic protease family signature 84 104 IPR001461 GO:0004190|GO:0006508
Mtr2g2830 491 PRINTS Pepsin (A1) aspartic protease family signature 311 322 IPR001461 GO:0004190|GO:0006508
Mtr2g2830 491 PRINTS Pepsin (A1) aspartic protease family signature 409 424 IPR001461 GO:0004190|GO:0006508
Mtr2g2830 491 PANTHER ASPARTYL PROTEASES 7 454 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2830 Mtr-Chr2 41806366 41810970 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g2830 73 438 Miscellaneous Gene Families AT1G44130 27.559 6.58e-40 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2830 - K00924 gmx:100791299 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g2830 2 41806366 41810970 Mtr2g2830 2 41806366 41810970 ECH
Mtr2g2830 2 41806366 41810970 Mtr4g1641 4 28742034 28747243 PCT