Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2524 ATGTCCAACAAAGGAAAAGACATAGTTGAAGGATCATCAAGATCTTCAATAGGTGATGATCAAAATCAGCAGCAGCAACAACAAATTCCGCTTAGTCGATACGAGTCACAAAAGAGAAGAGATTGGAACACTTTTGGACAATACTTAAGGAATCAAAGACCACCAGTGGCACTATCAAATTGTAATTCAAACCATGTTCTTGAATTCCTAAGGTACTTGGATCAATTTGGAAAAACAAAAGTGCACTTACAAGGTTGTTTGTTTTTCGGACAAACCGAACCACCTGGACCATGTACTTGTCCTCTAAAACAAGCTTGGGGAAGTCTTGATGCACTAATTGGAAGATTAAGAGCTGCTTATGAAGAAAATGGTGGATTACCTGAAACTAATCCTTTTGCTAGTGGTTCCATAAGAATCTATCTTCGTGAGGTGAGAGATTCTCAAGCTAAGGCTAGAGGAATTCCTTACAAGAAGAAAAAGAAGAAGAGGGTTGCAATTAAACATAACGGGGATACCTCAAATTTACCTATGCAGTAA 537 0.3818 MSNKGKDIVEGSSRSSIGDDQNQQQQQQIPLSRYESQKRRDWNTFGQYLRNQRPPVALSNCNSNHVLEFLRYLDQFGKTKVHLQGCLFFGQTEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGSIRIYLREVRDSQAKARGIPYKKKKKKRVAIKHNGDTSNLPMQ* 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2524 178 ProSiteProfiles ALOG domain profile. 33 160 IPR006936 -
Mtr2g2524 178 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 178 - -
Mtr2g2524 178 MobiDBLite consensus disorder prediction 1 37 - -
Mtr2g2524 178 PANTHER PROTEIN G1-LIKE2 2 178 IPR040222 -
Mtr2g2524 178 MobiDBLite consensus disorder prediction 1 33 - -
Mtr2g2524 178 MobiDBLite consensus disorder prediction 157 178 - -
Mtr2g2524 178 Pfam ALOG domain 25 146 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2524 Mtr-Chr2 38017034 38019796 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2524 - - gmx:100527554 306.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g3187 2 45663211 45667615 Mtr2g2524 2 38017034 38019796 ECH
Mtr4g2534 4 38897886 38908158 Mtr2g2524 2 38017034 38019796 ECH
Mtr2g2524 2 38017034 38019796 Mtr2g0492 2 4881786 4886304 ECH
Mtr2g2524 2 38017034 38019796 Mtr2g2524 2 38017034 38019796 ECH