Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g0492 ATGTCAAGCTCAATGCAAAACGACACCGTTCAAGCCTCATCTTCATCGTCCCGGCCCGGCGGCTCCGATCAACAACCAACAGCGGCAGTAGCTCCTTTGAGCCGTTATGAGTCACAAAAGAAACGTGACTGGAACACGTTTGGACAATACTTAAGGAACCAATCACCACCAGTTTCTTTGTCTCAGTGCAACTTCAACCATGTGCTTGAGTTCCTTCGTTACTTAGATCAATTTGGAAAGACTAAGGTTCACTTGCACGGTTGCATCTTTTTCGGACAACCCGATCCGCCGGCACCGTGTACTTGTCCGTTGAGACAAGCTTGGGGGAGTCTTGATGCACTCATCGGACGGCTAAGAGCTGCTTATGAAGAACACGGTGGATCGCCGGAGAATAATCCGTTTGGAACCGGAGCTATTCGTGTTTACCTTCGTGAAGTTAAGGAGTGTCAATCAAAGGCTAGAGGGATCCCTTACACAAAGAAAAAGAAGAAGAGGAGTCAACTTAAGGGCACTCATAATACTACTTCTAAGTCTTTCAACCAATTAGCTTCTTGA 555 0.4685 MSSSMQNDTVQASSSSSRPGGSDQQPTAAVAPLSRYESQKKRDWNTFGQYLRNQSPPVSLSQCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPENNPFGTGAIRVYLREVKECQSKARGIPYTKKKKKRSQLKGTHNTTSKSFNQLAS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g0492 184 PANTHER PROTEIN G1-LIKE2 2 177 IPR040222 -
Mtr2g0492 184 MobiDBLite consensus disorder prediction 1 35 - -
Mtr2g0492 184 Pfam ALOG domain 31 148 IPR006936 -
Mtr2g0492 184 MobiDBLite consensus disorder prediction 1 32 - -
Mtr2g0492 184 ProSiteProfiles ALOG domain profile. 35 162 IPR006936 -
Mtr2g0492 184 MobiDBLite consensus disorder prediction 156 170 - -
Mtr2g0492 184 MobiDBLite consensus disorder prediction 154 184 - -
Mtr2g0492 184 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g0492 Mtr-Chr2 4881786 4886304 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g0492 - - gmx:100306082 305.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr2g0492 2 4881786 4886304 Mtr2g0492 2 4881786 4886304 ECH
Mtr2g2524 2 38017034 38019796 Mtr2g0492 2 4881786 4886304 ECH
Mtr2g3187 2 45663211 45667615 Mtr2g0492 2 4881786 4886304 ECH
Mtr4g2534 4 38897886 38908158 Mtr2g0492 2 4881786 4886304 ECH