Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g2057 ATGTCTACACTTCTTCTACCTACACCTCCCCACCTCACCTCCCTCTACCGCCGCAACACCTTATCATCATCATCATCATCATCATCACTTCAATTTCACTCTCGCTTCTCTTTTTCTTCTTTTCACTCTCTTCCACAAACTCGTTCAAGAAGAACATGCATTTCCATTCGCGCTTTTGATTCTTCCTCCGACTCCAAAATCGAAGAAAAAGTTGTTCAAGAAGGTGAAAAAGTTAGAATTGCTGATGAAGATTATCCTAGTGGAGAATTTGAATTTGAACCTATTACTGGTTGGAGGAATTTCGTTGTTAAGGTTAGGATGTTCATTGCGTATCCATGGGAACGTATTCGTAAAGGTAGTGTTCTTACAATGAAGCTTCGTGGCGAGATATCTGATCAAGTGAAGAGTAAATTCTCTCCGGGACTTTCTCTACCTCAAATATGCGAGAATTTTTTGAAAGCAGCCTATGATCCTCGAATTTCTGGGGTCTATCTCCATATTGATAGTTTAGATTGTGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCACATCTTGAATTTCAAAAAATCAGGAAAATTTGTTGTGGCTTATCTCCCTACATGTCAAGAAAAAGAATATTACCTCGCATGTGCATGTGAAGAAATATATGCCCCTCCAAGTGCTTACTTTTCTTTGTTTGGATTGAGTGTTCAAGCCTCATTCATCAGAGGCGTTTTAGATAAAATAGGAGTTGAACCGCAAGTGGAAAGGATTGGCAAGTACAAAAGTGCAGGAGATCAATTAGCACGAACAAGCATGTCTGATGAAAATTGTGAGATGTTGACTGCATTACTAGATAATATCTATACAAACTGGCTGGATAAAGTCTCTTCTGCCAAAGGAAAAGGAAGAGAAGATATTGAGAACTTCATAAATGAAGGTGTTTATCAAGTTGATAAGCTGAAAGAAGAGGGCCTTATATCAAATTTAATGTATGATGATGAGGTTACTGACATGTTGAAGAAGAGACTTGGAGTGAAAAAAAAGAAAAAACTGCCAACGGTCGATTACAGGAAATACTCCCGGGTTAGTAAATGGACAGTTGGAATTTCAGGTGGCAAAAAACTGATAGCCATCATCCGGGCCTCAGGGAGCATTAGTCGAGTTAAGGGTCAATTAAGTCTCTTTAGCTCAGGTATCACTGCGGAGGAGTTCATTGAGAAGATTCGCACTGTCAGAGAGTCAAAAAAATTTAAGGCTGCTATTATCAGAATTGACAGTCCTGGAGGTGACGCTCTTGCCTCTGATTTGATGTGGAGAGAAATTCGGCTTTTAGCTGCTTCAAAGCCAGTCATTGCTTCGATGGCTGATGTGGCAGCAAGTGGAGGATACTACATGGCAATGGGAACTGATGCTATTGTTGCAGAAAGTCTTACCTTAACTGGTTCAATTGGAGTAGTCACAGGAAAATTTAACCTAGCGAAACTGTATGAGAAGATTGGCTTTAATAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTCGTTAGCGCTGATCAGCGTTCTTTTAGGCCAGATGAAGCAGAGCTATTTGCCAAATCTGCACAGAATGCATATAAACAATTTCGAGACAAGGCAGCTTTATCCAGATCTATGACTGTGGACAAGATGGAGAAGGTAGCACAGGGGAGAGTTTGGACTGGTAAAGATGCAGCATCACATGGTTTGGTTGATGCTATTGGTGGCCTTTCCCGAGCTATTGCCATAGCAAAATTGAAGGCCAATATACCTCAAGACGAACAGGTTACTGTTGTGGAGATATCCAGTTCTAGTCCCTCTCTACCGGAGATTTTATTTGGCGCACGGAGTTCCCTAACCGGCGTTGAAAGCACGTTGAAGGAACTGCTACAGGGGTTGACATTTTCTGATGGAGTTCAAGCTAGGATGGATGGAATCAGTTTTCGTTCATTGGAAGGATATCCCAACGACAACCCCATTTTGTCAATTATAAAAGATTACCTCAGTTCCCTGTAG 2013 0.4108 MSTLLLPTPPHLTSLYRRNTLSSSSSSSSLQFHSRFSFSSFHSLPQTRSRRTCISIRAFDSSSDSKIEEKVVQEGEKVRIADEDYPSGEFEFEPITGWRNFVVKVRMFIAYPWERIRKGSVLTMKLRGEISDQVKSKFSPGLSLPQICENFLKAAYDPRISGVYLHIDSLDCGWGKVEEIRRHILNFKKSGKFVVAYLPTCQEKEYYLACACEEIYAPPSAYFSLFGLSVQASFIRGVLDKIGVEPQVERIGKYKSAGDQLARTSMSDENCEMLTALLDNIYTNWLDKVSSAKGKGREDIENFINEGVYQVDKLKEEGLISNLMYDDEVTDMLKKRLGVKKKKKLPTVDYRKYSRVSKWTVGISGGKKLIAIIRASGSISRVKGQLSLFSSGITAEEFIEKIRTVRESKKFKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASMADVAASGGYYMAMGTDAIVAESLTLTGSIGVVTGKFNLAKLYEKIGFNKEIISRGRYAELVSADQRSFRPDEAELFAKSAQNAYKQFRDKAALSRSMTVDKMEKVAQGRVWTGKDAASHGLVDAIGGLSRAIAIAKLKANIPQDEQVTVVEISSSSPSLPEILFGARSSLTGVESTLKELLQGLTFSDGVQARMDGISFRSLEGYPNDNPILSIIKDYLSSL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g2057 670 Pfam Peptidase family S49 187 339 IPR002142 GO:0006508|GO:0008233
Mtr2g2057 670 Pfam Peptidase family S49 438 588 IPR002142 GO:0006508|GO:0008233
Mtr2g2057 670 Gene3D - 263 355 - -
Mtr2g2057 670 Gene3D - 119 262 - -
Mtr2g2057 670 SUPERFAMILY ClpP/crotonase 366 575 IPR029045 -
Mtr2g2057 670 SUPERFAMILY ClpP/crotonase 103 325 IPR029045 -
Mtr2g2057 670 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 370 583 IPR004635 GO:0006508|GO:0008233
Mtr2g2057 670 PIRSF Protease_4_SppA 56 670 IPR004634 GO:0006465|GO:0008233|GO:0016021
Mtr2g2057 670 Gene3D - 365 511 - -
Mtr2g2057 670 Gene3D - 512 636 - -
Mtr2g2057 670 CDD S49_SppA_67K_type 122 332 - -
Mtr2g2057 670 CDD S49_Sppa_N_C 370 584 IPR002142 GO:0006508|GO:0008233
Mtr2g2057 670 PANTHER PROTEASE 4 44 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g2057 Mtr-Chr2 30392167 30403681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g2057 K04773 - gmx:100781522 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4009 4 53905142 53913212 Mtr2g2057 2 30392167 30403681 PCT