Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1999 ATGAGCTGGTCAGGAGGAGATTGGATGTGCAATGCTTGCCAGCATATAAATTTCAAGAAGAGGGATGCATGCCAAAATTGTGGATACCCTAAGATTGGAGGCCCTGATCCAGAAACCTATAGATATAACTGGACTGAAACCTTGGCAGGGGACTGGTATTGCAGTGGTATGAACTGTGGAGCTCATAATTATGCTAGTAGAACAAGCTGTTATAGATGTGGTGCATTGAAAAATGATAACTCTTATGGATCTGATTGCAATTACCCCCCTGGATGGAAAACTGGTGATTGGATATGCACTAGATATGGCTGTGGAGTGCACAATTATGCTAGCAGAGGCGAATGCTTCAAGTGCAAAACACCCAAAAGTTTTGGTGGTTCAGATTGA 387 0.4289 MSWSGGDWMCNACQHINFKKRDACQNCGYPKIGGPDPETYRYNWTETLAGDWYCSGMNCGAHNYASRTSCYRCGALKNDNSYGSDCNYPPGWKTGDWICTRYGCGVHNYASRGECFKCKTPKSFGGSD* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1999 128 ProSiteProfiles Zinc finger RanBP2 type profile. 48 79 IPR001876 -
Mtr2g1999 128 ProSitePatterns Zinc finger RanBP2-type signature. 52 73 IPR001876 -
Mtr2g1999 128 Pfam Zn-finger in Ran binding protein and others 49 77 IPR001876 -
Mtr2g1999 128 Pfam Zn-finger in Ran binding protein and others 93 122 IPR001876 -
Mtr2g1999 128 SUPERFAMILY Ran binding protein zinc finger-like 89 124 IPR036443 -
Mtr2g1999 128 PANTHER ZINC FINGER PROTEIN 1 125 - -
Mtr2g1999 128 ProSiteProfiles Zinc finger RanBP2 type profile. 93 124 IPR001876 -
Mtr2g1999 128 PANTHER ZINC FINGER, RANBP2-TYPE-RELATED 1 125 - -
Mtr2g1999 128 ProSitePatterns Zinc finger RanBP2-type signature. 8 27 IPR001876 -
Mtr2g1999 128 SUPERFAMILY Ran binding protein zinc finger-like 48 80 IPR036443 -
Mtr2g1999 128 ProSitePatterns Zinc finger RanBP2-type signature. 97 118 IPR001876 -
Mtr2g1999 128 ProSiteProfiles Zinc finger RanBP2 type profile. 4 33 IPR001876 -
Mtr2g1999 128 SMART zf_4 95 121 IPR001876 -
Mtr2g1999 128 SMART zf_4 50 76 IPR001876 -
Mtr2g1999 128 SMART zf_4 6 30 IPR001876 -
Mtr2g1999 128 Gene3D - 1 35 - -
Mtr2g1999 128 Gene3D - 44 80 - -
Mtr2g1999 128 Gene3D - 86 124 - -
Mtr2g1999 128 SUPERFAMILY Ran binding protein zinc finger-like 2 33 IPR036443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1999 Mtr-Chr2 28996027 28997576 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1999 - - aprc:113848031 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4100 4 54968069 54970173 Mtr2g1999 2 28996027 28997576 PCT