Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1993 ATGACAGAATCAAAACAAGATACACCCTTGTTAGCGCCATCGTCGTCGCGGATCCTTCCAGATTTCAAGAAATCAGTGAAATTGAAGTATGTGAAGCTTGGTTATCATTACCTAATCACTCATGGCATGTACCTCTTTCTTTCACCACTTGTGGTGTTAATTGCAGCTCAGTTATCAACTTTCTCCCTCAATGATATCTATGATATCTGGGAAAATCTGCAGTACAATCTGGTATCCGTTATTATTTGCTCGACTCTCCTTGTGTTTTTATCGACCTTTTACTTTATGACTCGTCCTAGGCCAGTCTACCTTGTCAATTTCTCGTGTTACAAGCCGGAAGAGTCTCGCAAATGCACTAAAAGGATATTTATGGATCACTCGAGGGCGAGTGGTTTCTTCACGGAGGAGAATCTTGATTTCCAGCGAAAGATCCTTGAGAGATCTGGTCTTGGAGAAAACACTTACCTACCAGAAGCTGTTCTAAGCATTCCTCCCAATCCTTCAATGAAAGAAGCTAGGAAAGAAGCGGAGGCAGTTATGTTTGGCGCTATCGATGAGCTGTTTTCGAAGACAACGGTAAAGCCTAAAGACATTGGAATTCTGATTGTGAATTGTAGTCTTTTTTGTCCAACTCCGTCACTCTCTGCAATGATCATCAATCACTATAAGCTGAGAGGTAACATAATGAGTTACAATCTTGGTGGGATGGGATGCAGTGCTGGGATTATTTCAATTGATCTTGCTAAAGAGCTTCTCCAGGTCCATCCTAACTCGTATGCGTTGGTTGTTAGCATGGAGAACATCACATTGAATTGGTATCCTGGGAACGATCGATCCAAGCTTGTTTCGAATTGTTTGTTTCGTATGGGAGGGGCTGCAATTCTACTTTCCAACAGGAGCTCTGATAGGAGAAGATCCAAATACCGATTGGTCCACACCGTTCGCACTAACAAGGGTGCTGATGACAAGTGCTTCAGCTGCGTTACACAAGAAGAAGACGACAATGGCAAAGTTGGTGTTACTTTATCAAAAGATCTTATGGCCGTTGCAGGTGATGCCTTGAAAACAAACATTACCACGTTGGGGCCACTTGTCCTTCCAACGTCTGAACAGCTGCTGTTCTTCGCTACGTTAGTTGGAAAGAAACTCTTCAAGATGAAGATCAAGCCTTATATTCCAGATTTCAAGCTAGCTTTCGAACATTTCTGCATTCATGCCGGTGGAAGAGCTGTTTTAGATGAGCTAGAGAAAAACTTGAAGCTGTCTCCATGGCATATGGAGCCGTCAAGAATGACACTTTATCGTTTTGGAAACACCTCGAGCAGTTCGCTTTGGTACGAATTGGCTTACACGGAAGCCAAGGGAAGGATCAAGAAAGGAGATAGAACATGGCAAATAGCATTTGGTTCTGGATTCAAGTGCAACAGCGCAGTATGGAAGGCTCTAAGGACAATCAATCCTGCAAAAGAGAAGAACCCTTGGATCGATGAGATCCACCAGTTTCCGGTTGATGTTCCAAGAATTTCTGCCATCTAA 1536 0.431 MTESKQDTPLLAPSSSRILPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVLIAAQLSTFSLNDIYDIWENLQYNLVSVIICSTLLVFLSTFYFMTRPRPVYLVNFSCYKPEESRKCTKRIFMDHSRASGFFTEENLDFQRKILERSGLGENTYLPEAVLSIPPNPSMKEARKEAEAVMFGAIDELFSKTTVKPKDIGILIVNCSLFCPTPSLSAMIINHYKLRGNIMSYNLGGMGCSAGIISIDLAKELLQVHPNSYALVVSMENITLNWYPGNDRSKLVSNCLFRMGGAAILLSNRSSDRRRSKYRLVHTVRTNKGADDKCFSCVTQEEDDNGKVGVTLSKDLMAVAGDALKTNITTLGPLVLPTSEQLLFFATLVGKKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLKLSPWHMEPSRMTLYRFGNTSSSSLWYELAYTEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTINPAKEKNPWIDEIHQFPVDVPRISAI* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1993 511 Pfam FAE1/Type III polyketide synthase-like protein 94 383 IPR013601 GO:0006633|GO:0016020|GO:0016747
Mtr2g1993 511 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 400 480 IPR013747 -
Mtr2g1993 511 PIRSF Very_long_ch_3-ktacl-CoA_syn 21 511 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mtr2g1993 511 CDD CHS_like 87 479 - -
Mtr2g1993 511 SUPERFAMILY Thiolase-like 311 480 IPR016039 GO:0016746
Mtr2g1993 511 Gene3D - 113 481 IPR016039 GO:0016746
Mtr2g1993 511 PANTHER 3-KETOACYL-COA SYNTHASE 3 510 IPR012392 GO:0006633|GO:0016020|GO:0016747
Mtr2g1993 511 PANTHER 3-KETOACYL-COA SYNTHASE 11 3 510 - -
Mtr2g1993 511 SUPERFAMILY Thiolase-like 88 306 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1993 Mtr-Chr2 28894219 28896880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1993 3 511 Miscellaneous Gene Families AT2G26640 82.711 0.0 900
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1993 K15397 - gmx:100817884 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4078 4 54681500 54683955 Mtr2g1993 2 28894219 28896880 PCT