Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1559 ATGGCGAGGCTTCTCCGAAGTACCTTTTTCCTTAATCGCTCTTTCTTCCACCATCACCTTCCAACGCGCTTTTGTTCCAAAAATGGAGTTTTGGGCACATCTCAAGTTTTGAGCTTTTCAACCAATAAAGGTAAGAAGCGCTCTAAATCAGATGGAAGTGACTCGGGTGAAGAGAACATGTCTAAGAAAGATTTGGCCCTACAACAAGCCATGGATCAGATCACCTCTACATTTGGAAAGGGATCGATCATGTGGCTTGGTCGTACTGTCTCACCCAAAAATGTACCTGTGGTGTCAACCGGTTCTTTTGCTCTTGATATAGCGCTAGGAATTTTCGGTCTTCCCAAGGGACGTGTTGTGGAAATATTCGGTCCAGAGGCTTCTGGGAAAACAACTCTTGCTTTGCATGTTATTGCAGAGGCGCAGAAGCAAGGAGGCTATTGTGCCTTTATTGATGCTGAGCATGCACTTGACAAGTCACTTGCAGAATCTATTGGCGTAAATACTGAGAACTTGCTTCTCTCACAACCAGATTGTGGTGAACAGGCACTTAGCCTCGTGGATACCTTAATTCGGAGTGGTTCGATTGATGTCATTGTTGTCGACAGCGTGGCTGCTCTTGTTCCTAAAGGTGAGCTTGATGGTGAGATGGGTGATGCTCACATGGCAATGCAAGCTAGGTTGATGAGCCAGGCTCTTCGGAAATTGTGCCACTCCTTGTCACTTTCACAGTGTATATTGATTTTTATAAACCAGGTAAGGTCGAAGATTTCTACTTTTGGCGGATTCGGTGGGCCTACTGAAGTTACTTGTGGTGGTAATGCTTTGAAATTCTATTCTTCTGTGAGGCTAAATATCAAAAGAGTAGGGTTTGTCAAGAAGGGTGAAGAGACTGTAGGAAGTCAGGTTCTTGTCAAGGTTGTGAAGAACAAGCACGCCCCTCCATTTAAAACTGCACAATTTGAGCTTGAGTTTGGCAAGGGCATATGCAGAGAAGCAGAGATTATAGAGCTGAGCATAAAACACAAATTCATAAAAAAGAGTGGTTCGTTTTACGAATATAATGGCAAGAATTACCATGGCAAGGATGCACTAAAAAGTCACCTGATCAACGGCGATGGCTTACAAGATTTAACTACAAAGCTTCGAGAAAAGCTTCTCAATGCTGAGACGGAAACCGTTTCAGAATCACAAGAGATGGTTGGAGATGTTACGGAAGAAATGTTATCACCCGATTCTACTGATGAAGAAACTGCTGTTGTTGCAGAAGCTTGA 1275 0.4353 MARLLRSTFFLNRSFFHHHLPTRFCSKNGVLGTSQVLSFSTNKGKKRSKSDGSDSGEENMSKKDLALQQAMDQITSTFGKGSIMWLGRTVSPKNVPVVSTGSFALDIALGIFGLPKGRVVEIFGPEASGKTTLALHVIAEAQKQGGYCAFIDAEHALDKSLAESIGVNTENLLLSQPDCGEQALSLVDTLIRSGSIDVIVVDSVAALVPKGELDGEMGDAHMAMQARLMSQALRKLCHSLSLSQCILIFINQVRSKISTFGGFGGPTEVTCGGNALKFYSSVRLNIKRVGFVKKGEETVGSQVLVKVVKNKHAPPFKTAQFELEFGKGICREAEIIELSIKHKFIKKSGSFYEYNGKNYHGKDALKSHLINGDGLQDLTTKLREKLLNAETETVSESQEMVGDVTEEMLSPDSTDEETAVVAEA* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1559 424 Hamap Protein RecA [recA]. 63 390 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 ProSiteProfiles RecA family profile 2. 263 334 IPR020587 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Mtr2g1559 424 ProSitePatterns recA signature. 275 283 IPR020584 GO:0003677|GO:0005524|GO:0006259|GO:0008094
Mtr2g1559 424 SMART AAA_5 116 290 IPR003593 -
Mtr2g1559 424 Gene3D - 93 391 IPR027417 -
Mtr2g1559 424 ProSiteProfiles RecA family profile 1. 94 253 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Mtr2g1559 424 MobiDBLite consensus disorder prediction 390 424 - -
Mtr2g1559 424 TIGRFAM tigrfam_recA: protein RecA 63 375 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 PRINTS RecA protein signature 152 181 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 PRINTS RecA protein signature 186 215 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 PRINTS RecA protein signature 224 253 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 PRINTS RecA protein signature 272 300 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 PRINTS RecA protein signature 305 334 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 Pfam recA bacterial DNA recombination protein 66 329 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 PANTHER REPAIR PROTEIN RECA, PUTATIVE-RELATED 1 413 - -
Mtr2g1559 424 CDD recA 62 388 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 MobiDBLite consensus disorder prediction 44 61 - -
Mtr2g1559 424 SUPERFAMILY RecA protein, C-terminal domain 331 381 IPR023400 -
Mtr2g1559 424 MobiDBLite consensus disorder prediction 41 61 - -
Mtr2g1559 424 PANTHER RECA 1 413 IPR013765 GO:0003697|GO:0005524|GO:0006281
Mtr2g1559 424 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 329 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1559 Mtr-Chr2 17414437 17422786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1559 K03553 - gmx:100798983 675.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4656 4 60540782 60546595 Mtr2g1559 2 17414437 17422786 PCT