Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr2g1519 ATGTATGCTTTGGATCAATTTCAGCTTCTTCATCAGGATCATCAGATGACAATGAAGATGGATCATATGACAACAAGGAAGAGAGAGACAAAAAAGACGTCGCCGTCGCCGCCGAGGGAGGAAGATAAAGTTCATGTTGTGGACTTGCATGGCATGTCTTTGGACTCACTTCCAAAACTTTCTCTTGATTTAGCTATTATTTCCAAGCTCAATTTATCTAACAATAATCTCCAGAACATTCCGGAGTCATTAACAGCAAGATTATTAAACTTGGAAATGTTGGACGTGCACTCCAACCAGCTTAGATCCCTACCCAATTCCATTGGTTGTCTCTCTAAACTCAAAGTTTTGAATGTCTCTGGAAACTTCATCCAATCCCTCCCTGCAACCATTGAGAATTGCAGAGCCTTAGAAGAACTGAATCTCAACTTCAACATGTTGAGCAAACTTCCAGACACAATAGGCTTTGAGCTCATAAAACTCAAGAAGCTTGCAGTGAACTCCAATAAGCTGGTGTGTCTTCCTAGATCCACCTCTCACATGATGACTCTTATGGTTCTCGACGTACGTTTGAACTGCCTCAGGAGTCTCCCCGACGACCTTGAGAACCTCGTCAATCTTGAAACCCTGAATGTGAGTCAGAATTTTCGGTACTTGGAGTCATTGCCCTACTCCATAGGACTCCTCTTGTCCCTAGTTGAACTAGATGTTAGCTACAACAATATCAAAACATTGCCCGACTCCATCGGATGCCTCCAGAAGCTCCAAAAGCTAAGTGTGGAGGGAAACCCACTCATTTCGCCTCCACAGGAGGTGGTGGAGCAGGGATTGCATGTGGTAAAAGAGTACATGTGCAACAAAATGAACTCAAGCCATCATATCCCAACCAAAAAGAGATGGTGGATGGTGAAATGTGGGACCTTCAATGGAGAAATGAAACGTTCAGAACATAAGGGTTTCCACAAGCTTCATTATCAACCCATGAATGGTCTTGCTTCACCAGGCTTCATGGGGAGGTTGTCGCCTCTTCGTCTCTTCTCACCCCGTCGTTCCTTAAGTTGA 1062 0.4407 MYALDQFQLLHQDHQMTMKMDHMTTRKRETKKTSPSPPREEDKVHVVDLHGMSLDSLPKLSLDLAIISKLNLSNNNLQNIPESLTARLLNLEMLDVHSNQLRSLPNSIGCLSKLKVLNVSGNFIQSLPATIENCRALEELNLNFNMLSKLPDTIGFELIKLKKLAVNSNKLVCLPRSTSHMMTLMVLDVRLNCLRSLPDDLENLVNLETLNVSQNFRYLESLPYSIGLLLSLVELDVSYNNIKTLPDSIGCLQKLQKLSVEGNPLISPPQEVVEQGLHVVKEYMCNKMNSSHHIPTKKRWWMVKCGTFNGEMKRSEHKGFHKLHYQPMNGLASPGFMGRLSPLRLFSPRRSLS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr2g1519 353 MobiDBLite consensus disorder prediction 19 42 - -
Mtr2g1519 353 ProSiteProfiles Leucine-rich repeat profile. 231 252 IPR001611 GO:0005515
Mtr2g1519 353 SMART LRR_typ_2 229 252 IPR003591 -
Mtr2g1519 353 SMART LRR_typ_2 135 157 IPR003591 -
Mtr2g1519 353 SMART LRR_typ_2 88 110 IPR003591 -
Mtr2g1519 353 SMART LRR_typ_2 111 134 IPR003591 -
Mtr2g1519 353 SMART LRR_typ_2 64 87 IPR003591 -
Mtr2g1519 353 SMART LRR_typ_2 158 181 IPR003591 -
Mtr2g1519 353 SMART LRR_bac_2 252 271 - -
Mtr2g1519 353 SMART LRR_bac_2 158 177 - -
Mtr2g1519 353 SMART LRR_bac_2 204 225 - -
Mtr2g1519 353 SMART LRR_bac_2 134 153 - -
Mtr2g1519 353 SMART LRR_bac_2 88 107 - -
Mtr2g1519 353 SMART LRR_bac_2 229 248 - -
Mtr2g1519 353 SMART LRR_bac_2 64 83 - -
Mtr2g1519 353 SMART LRR_bac_2 111 130 - -
Mtr2g1519 353 SUPERFAMILY L domain-like 41 267 - -
Mtr2g1519 353 Pfam Leucine rich repeat 160 215 IPR001611 GO:0005515
Mtr2g1519 353 Pfam Leucine rich repeat 68 122 IPR001611 GO:0005515
Mtr2g1519 353 ProSiteProfiles Leucine-rich repeat profile. 90 111 IPR001611 GO:0005515
Mtr2g1519 353 PANTHER LEUCINE-RICH REPEAT-CONTAINING 1 347 - -
Mtr2g1519 353 Gene3D Ribonuclease Inhibitor 157 286 IPR032675 -
Mtr2g1519 353 Gene3D Ribonuclease Inhibitor 4 156 IPR032675 -
Mtr2g1519 353 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 1 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr2g1519 Mtr-Chr2 16857432 16860814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr2g1519 70 312 Receptor kinase-like Gene Family AT5G51350 31.518 2.36e-16 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr2g1519 - - lja:Lj6g3v1315120.1 468.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr4g4684 4 60870721 60874154 Mtr2g1519 2 16857432 16860814 PCT