Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g2510 ATGGCGAATAACTGCAACACCACAATTCTCAAGGAAGTTAGAATCGTCATTGTTGGTGACAAATCCGCCGGCAAAACCACCCTCATTTCCGCCATGGCTTCTGATTCTTTCCCCGCCACCGTTCCTCCATTGCTTCGTCCCACTCACTTGCCTTCCAATTCATTCACTGATTCTGTTCCTCTCATCCTCATTGACACTCCTTCAAGTGTGGGAGAACAAGGCAAGGTTGTTGAAGAATTGAAGCGTGCTGATTCGGTGATTGTAACTTATGCTTGTGATAATACAATGAGTTTTGAGCGTGTGAGTACTCACTGGCTGCCTCAACTGCAGAAGCTTGAGGTGAAGGCACCTGTGCTTGTGGTTGGTTGTAAGCTTGATCTTCGCGATGAAAGTAGGCAAGTTAGCTTAGAGAGTCTTACCACAGGTATCATGAACCAGTTCAGAGAAGTTGTTACTTGTATTGAGTGCTCTGCAGCTACACTTTATCAGGTTCCCGAAGTTTTTTATTTTGCACAAAAAGCGGCACTTCATCCGGTGGATCCTTTGTTCGATTATGATACAAATGCTTTAACAGATCGGTGTGTAAGGGCACTGAGAAGAATATTTAATCTTTTTGATTACAACATGGATGGCACCCTCACTGATCATGAAGTAAACGAGTTTCAGATTAGAAGCTTCGGTGCATCATTGCAGCAGCCTGACATAACTCAATTAAAAACAATGGTACTGCGGAATGTTCCTGAAGGAGTCAATTCTCTTGGTCTTACTTTTCCTGGCTTCATTGAAATCCATAATATGTTTCTAAAGAAAGGGCGAACAGAGACATTCTGGGCAGTTCTAAGAAAGTTTGGATATGGTAACGATTTAAAACTGCGGGATGATTTTCTTCCAGTTCCATCAAAGAAGGCTTCTGATCAGAGTGTGGAGCTGAGTGGTGCAGCCATAGAGTTTCTGAAGGGTGTTTTTAGATTGGTAGATACGGATAAGGATCAATTACTACGACCTGCAGAAGTTGATAAGCTATTTGATGCTGCTCCAGAAAGTCCGTGGAAGGATGCGCCATATATGGACGCAGCTGAGACAACTGACATGGGTTATATATCTCTGAAGGGATTTCTTTCTCGGTGGGCTCTTATGACATTACTGGATCCAAGGTATAGCTTGGCCAATTTGATTTGCATCGGATATAGAGATAATCCTTCTGCAGCACTCCGCCTCACCAGTAGAAGATCAGAAGATCGCAAGAACCAAAAAACAGAAAGAAATGTGTTCCAATGCTATGTTTTTGGTTCTAAAACTGCCGGGAAATCTGCTTTGTTGCGTGCATTATTGGGAAGGCCTTTCTCAAATGACTATACCCCGACAACTGTTGAGAGGTATGCAGCAAACATCATTGAATTAATAGCGGGAACTAAGAAAACTCTCATACTGCGCGAAATTCCGGAGGATGAAGTATCGAATTTTTTGTCGAATAAGGATTGTTTGGCTGCATGTGATGTAGCTGCATTTGTACACGACAGCTCAGATGGATATTCATGGAAAAGATCCATAGATTTGCTTGAGAAGGTTGTTAACCAAGGAGAGCTAACTGGTCACAGATTTCCTAGTCTCCTCATCGCTGCTAAGGATGATTTAACTCCATTCCCAAGGGCAGTACTAGATTCAGTTAAGGTTGCTCAGGAATTGAAAATAGACGCTCCTATTCGCTTGAGTATAAAATCAGATGATTCAAATAACGTGTATAGTAAGATTATCAATGCTGCAGAACACCCTCATTTGAGTATTCCAGAAACTGAGTTTGTGAGGAAAAGAAAGCAACACCAGCAGCTTCTTCACACTTTTATATTTGCCTTAGCTGGGGCTGCTATGGCGCTAGCGGGTTTTACAGCTCGTCGTGCACGTGCGAATAGGAATTCTTCTTAG 1923 0.4259 MANNCNTTILKEVRIVIVGDKSAGKTTLISAMASDSFPATVPPLLRPTHLPSNSFTDSVPLILIDTPSSVGEQGKVVEELKRADSVIVTYACDNTMSFERVSTHWLPQLQKLEVKAPVLVVGCKLDLRDESRQVSLESLTTGIMNQFREVVTCIECSAATLYQVPEVFYFAQKAALHPVDPLFDYDTNALTDRCVRALRRIFNLFDYNMDGTLTDHEVNEFQIRSFGASLQQPDITQLKTMVLRNVPEGVNSLGLTFPGFIEIHNMFLKKGRTETFWAVLRKFGYGNDLKLRDDFLPVPSKKASDQSVELSGAAIEFLKGVFRLVDTDKDQLLRPAEVDKLFDAAPESPWKDAPYMDAAETTDMGYISLKGFLSRWALMTLLDPRYSLANLICIGYRDNPSAALRLTSRRSEDRKNQKTERNVFQCYVFGSKTAGKSALLRALLGRPFSNDYTPTTVERYAANIIELIAGTKKTLILREIPEDEVSNFLSNKDCLAACDVAAFVHDSSDGYSWKRSIDLLEKVVNQGELTGHRFPSLLIAAKDDLTPFPRAVLDSVKVAQELKIDAPIRLSIKSDDSNNVYSKIINAAEHPHLSIPETEFVRKRKQHQQLLHTFIFALAGAAMALAGFTARRARANRNSS* 641
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g2510 640 Pfam Ras family 14 174 IPR001806 GO:0003924|GO:0005525
Mtr1g2510 640 CDD Miro2 420 600 - -
Mtr1g2510 640 Pfam EF hand associated 350 417 IPR013566 -
Mtr1g2510 640 PRINTS Transforming protein P21 ras signature 13 34 - -
Mtr1g2510 640 PRINTS Transforming protein P21 ras signature 114 127 - -
Mtr1g2510 640 PRINTS Transforming protein P21 ras signature 153 175 - -
Mtr1g2510 640 PANTHER RHO FAMILY GTPASE 6 485 IPR003578 GO:0005525|GO:0007264
Mtr1g2510 640 Gene3D - 185 289 - -
Mtr1g2510 640 ProSiteProfiles Miro domain profile. 10 177 IPR020860 GO:0003924|GO:0005525
Mtr1g2510 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 420 594 IPR027417 -
Mtr1g2510 640 SMART ras_sub_4 10 178 - -
Mtr1g2510 640 SUPERFAMILY EF-hand 191 383 IPR011992 -
Mtr1g2510 640 Gene3D - 9 180 IPR027417 -
Mtr1g2510 640 PIRSF Miro 9 640 IPR021181 GO:0003924|GO:0005509|GO:0005525|GO:0007005|GO:0031307
Mtr1g2510 640 SMART rho_sub_3 15 178 IPR001806 GO:0003924|GO:0005525
Mtr1g2510 640 ProSiteProfiles EF-hand calcium-binding domain profile. 313 348 IPR002048 GO:0005509
Mtr1g2510 640 Pfam EF hand associated 229 313 IPR013567 -
Mtr1g2510 640 PANTHER MITOCHONDRIAL RHO GTPASE 6 485 - -
Mtr1g2510 640 Gene3D - 486 588 IPR027417 -
Mtr1g2510 640 SMART rab_sub_5 13 178 - -
Mtr1g2510 640 ProSitePatterns EF-hand calcium-binding domain. 206 218 IPR018247 -
Mtr1g2510 640 Gene3D - 291 481 - -
Mtr1g2510 640 ProSiteProfiles Miro domain profile. 421 590 IPR020860 GO:0003924|GO:0005525
Mtr1g2510 640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 11 208 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g2510 Mtr-Chr1 35987162 35995631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g2510 13 640 EF-hand Containing Proteins AT3G63150 52.146 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g2510 K07870 - gmx:100806983 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2800 7 44697411 44706847 Mtr1g2510 1 35987162 35995631 PCT