Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0260 ATGCTGTGTAAACTTGTTCCGTTGCCGCGGAAGAAAAAACCCGGTTCGGTTCCGGTTTACCTCAACGTTTATGATCTTACCCCAATTAATGGTTACGCTTATTGGTTTGGTCTTGGTGTTTATCATTCTGGTGTTCAAGTTCATGGTGTTGAATATGGGTTTGGTGCACATGATCGTGAAACGACGGGGATTTTTGAAGTTGAGCCTAGACACTGTCCAGGATTTACCTTTAGGAAATCAATTTACATTGGATCAACAGAACTGGGACCGAAGGATGTTCGGGAATTTATGGAGAAGCTAGCTCAAGAGTATGCTGGAAATACATATCATCTTATACAAAAGAATTGCAACCATTTCTGTAATGATGTTTGTGTCAGAATAACTGGAAAGTCGATTCCACGATGGGTTAATAGACTTGCTCGACTCGGTTTTTTCTGCAACTGCGTTCTTCCAACCAGCCTAAATGAAACAAAGGTTGGACAAGTTTCATTGGACAAGATTCAGGAAGGAGAAAGTAAGAAAATGAGAAGTCAGTCCCGCAGGCACGAGGTTTCCTCCAATCCTACGCTGTCTGCTAGCCAAAGACGACATTGCGTTCGTCCATCTTCATCTGTAATTAATGCTTCTTCGACCTCAACCGTAGCAGTAAAGTAA 654 0.422 MLCKLVPLPRKKKPGSVPVYLNVYDLTPINGYAYWFGLGVYHSGVQVHGVEYGFGAHDRETTGIFEVEPRHCPGFTFRKSIYIGSTELGPKDVREFMEKLAQEYAGNTYHLIQKNCNHFCNDVCVRITGKSIPRWVNRLARLGFFCNCVLPTSLNETKVGQVSLDKIQEGESKKMRSQSRRHEVSSNPTLSASQRRHCVRPSSSVINASSTSTVAVK* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0260 217 MobiDBLite consensus disorder prediction 168 217 - -
Mtr1g0260 217 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 215 - -
Mtr1g0260 217 Gene3D PPPDE domains 12 174 IPR042266 -
Mtr1g0260 217 MobiDBLite consensus disorder prediction 182 217 - -
Mtr1g0260 217 Pfam PPPDE putative peptidase domain 18 152 IPR008580 GO:0008233
Mtr1g0260 217 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Mtr1g0260 217 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Mtr1g0260 217 PANTHER DESUMOYLATING ISOPEPTIDASE 2 215 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0260 Mtr-Chr1 2891829 2894636 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0260 K22763 - gmx:100786432 377.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0260 1 2891829 2894636 Mtr3g3870 3 52522168 52524519 PCT