Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0235 ATGGCTTCCAACAAGCTTAGTGCACTAATTATATTATTTTCTCTCCTTTCTTATTCAACATTTTCACATGCTTGTGGTTCATGCAAACCAACTCCAACAAGTCCTCCACCACCTTCTACAACACCTAAGGCTAGCCCTCCACCTAAGGCTAGTACTCCACCACCTTCGACAACACCTAAGTCTAGTCCTCCAACTCCTTCAACATCACAAAAATGTCCTAGTGACACATTAAAGCTAGGTGTATGTGCTGATGTTCTAGGACTTGTTAATGTTATTGTTGGAAGTCCTGCTTCAAGCAAGTGTTGTACATTGATTCAAGGTTTGGCTGATTTGGACGCAGCAGTTTGTCTTTGTACCGCTATTAAGGCTAATGTTCTTGGTATCAACTTGAATGTGCCTGTCACACTTAGTCTCCTACTTAGTGCTTGTGAAAAATCTGTTCCTAATGGTTTCCAATGTTCATAG 465 0.4108 MASNKLSALIILFSLLSYSTFSHACGSCKPTPTSPPPPSTTPKASPPPKASTPPPSTTPKSSPPTPSTSQKCPSDTLKLGVCADVLGLVNVIVGSPASSKCCTLIQGLADLDAAVCLCTAIKANVLGINLNVPVTLSLLLSACEKSVPNGFQCS* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0235 154 MobiDBLite consensus disorder prediction 30 62 - -
Mtr1g0235 154 PANTHER PROLINE-RICH PROTEIN DC2.15 1 154 - -
Mtr1g0235 154 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 75 153 IPR036312 -
Mtr1g0235 154 SMART aai_6 72 153 IPR016140 -
Mtr1g0235 154 Gene3D - 69 154 IPR036312 -
Mtr1g0235 154 PANTHER - 1 154 - -
Mtr1g0235 154 CDD HPS_like 70 153 IPR027923 -
Mtr1g0235 154 Pfam Hydrophobic seed protein 72 154 IPR027923 -
Mtr1g0235 154 MobiDBLite consensus disorder prediction 29 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0235 Mtr-Chr1 2631605 2632439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g0235 62 153 Acyl Lipid Metabolism Gene Families AT4G22490 41.053 7.67e-17 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0235 - - mtr:MTR_1g012710 202.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0235 1 2631605 2632439 Mtr3g3895 3 52784033 52784923 PCT