Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g0155 ATGGCGGAAGAGAAAACGGTTACTACCGCCGGTGGCGAGAAGAAATCGACGGCGAGTGACACTGTTACTTCTTCTACTTCTCCGGCGGGAAATGGAAAGAAGAAGCGTAAAGGTTTCGTTTCTCGAATTTGGAATTTTGTATTTAGGTCTAATAAAGATGATTTTGAGAAGAGGCTTCAGTGTATTTCCAAAGAAGAAACTTCTGTTATGACTAGAATGAATAACAGATCCCGTTCTTGGAGGCGAACCTCTCGCCACATTATTCTTTTTTCTGTTTTATTTGAGATAATTGCTGTATCTTATGCGATTATGACCACAAGATCCACAGATATGAATTGGAAAATGAGGGCGATTCGAGTTTTGCCGATGTTTCTTTTGCCTGCCTTATCATCTGCTGCATATTCAACATTTGTAAGCTTCATAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGATAGGCTGAGAGCTGAAAGGAAGGAAAAAATTGACGAGCTCAAGGAGAGGACAAATTATTACGTTACTCAACAACTCATTCAGAAATATGACACAGACCCTGCAGCAAAGGCAGCTGCTGCAACTAGTTTGGCATCCAAATTGGGTGCAGATTCGGGTTTGAAATTGTATATGGAAGATGAATCTAAATCTGGTGCTCCAGCAGGAAAGGCCAACAATGTTGAACCTGTGCAGTCTAGTGGACTTCGAAATCGCAAACAAGGGCAAACTCAATCCACTAATCTGGGGACAACTACCCCAAATCACACTGATCAGCAATTAGTTGCTTCTGGGGGTGATCAAACTCAGACTCGTGTGCAGAAACAGCCTGTAGTTGTTGAGCATCACCAACCTCAAAGCTCAAATAAGTATGCTGGAGGATGGATTGCTCAAATTGCAGCATTGCTTGTGGGTGAGGATCCGCTGCAGTCTTACGCACTCATATGTGGTAACTGCTATATGCATAATGGTCTTGCTCGGAGAGATGATTACCCATTTATCACTTACTACTGCCCACACTGTCACGCCCTGAACAAACCAAAGCAATTGGCTGAGCCCATTTCTGGTTTTAATTCACCAAACACGGAGCCCCAAAAAACAGATGCTGGAGAGGCAGTTAAAAGTGCTGGTATCGATGCTTCTGACAGCTTGGCTAGAAATATTAAACTGGTAAAGGCTACCCCTGAGATTGAGCACATATCTGAAGGAGCTGATTTAGAGAAAGAAACAAACCACGACTCTGGTTTTAATTCACTAAACACGGGATCCCCAAAAACAGAAGATGGAGAGGCAGTTAAAGATGCTAGTATCTGCGCTTCTTCTGATAGCTTGGTCAGTAACATTAAACCGGTAGATGCTACCCCTGAGTGCGAGCAAATATCTGAAGGGTGGACTAATTTAGGGAAAGAAGAAAGCTGA 1413 0.4303 MAEEKTVTTAGGEKKSTASDTVTSSTSPAGNGKKKRKGFVSRIWNFVFRSNKDDFEKRLQCISKEETSVMTRMNNRSRSWRRTSRHIILFSVLFEIIAVSYAIMTTRSTDMNWKMRAIRVLPMFLLPALSSAAYSTFVSFIRMCDRRDQKILDRLRAERKEKIDELKERTNYYVTQQLIQKYDTDPAAKAAAATSLASKLGADSGLKLYMEDESKSGAPAGKANNVEPVQSSGLRNRKQGQTQSTNLGTTTPNHTDQQLVASGGDQTQTRVQKQPVVVEHHQPQSSNKYAGGWIAQIAALLVGEDPLQSYALICGNCYMHNGLARRDDYPFITYYCPHCHALNKPKQLAEPISGFNSPNTEPQKTDAGEAVKSAGIDASDSLARNIKLVKATPEIEHISEGADLEKETNHDSGFNSLNTGSPKTEDGEAVKDASICASSDSLVSNIKPVDATPECEQISEGWTNLGKEES* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g0155 470 MobiDBLite consensus disorder prediction 1 35 - -
Mtr1g0155 470 MobiDBLite consensus disorder prediction 225 273 - -
Mtr1g0155 470 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 21 402 IPR040115 GO:0071786
Mtr1g0155 470 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 293 343 IPR019273 -
Mtr1g0155 470 MobiDBLite consensus disorder prediction 11 31 - -
Mtr1g0155 470 MobiDBLite consensus disorder prediction 405 430 - -
Mtr1g0155 470 PANTHER INTEGRAL MEMBRANE METAL-BINDING FAMILY PROTEIN (DUF2296) 21 402 - -
Mtr1g0155 470 MobiDBLite consensus disorder prediction 214 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g0155 Mtr-Chr1 1725464 1731412 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g0155 K23292 - gmx:100796079 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g0155 1 1725464 1731412 Mtr3g3993 3 53678854 53683287 PCT