Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0799 ATGTCGAAGTTACTTCTCCACAGTTCTCATCTCACCTTCGTTCACCGATTCATCACCTTCCCTCCCTCTACTGCCTCCTTTTCTCGCCTCCATTTTCGAAACCGCTCCTTTGTTTCGATTTCTTCTCAATCGAACCTTCGAAGAATTTTCCCCTTTCACTCCCGTGGAGACCTATCAGTTTGTGCTTTCGATTCTTCATCTTCTGAGACTAAAGACGAAGAAGAAGCTTCCGGGAAGGATGGAATTAATAATCAGTTTGTTAAAACTTCCGATGAGGATTATCCGACTGGGGAATTTGAATTTCAACCGATTACTGGATGGAGAGGATTTCTTGTGAAGCTTAAGATGCTAATTGCTTTCCCTTGGGAGCGTGTTCGCAAGGGTAGTGTTCTCACCATGAAGTTGCGCGGCCAGATATCTGATCAAGTGAAGAGTAGATTTTCCCGAGGATTATCTCTTCCTCAGATTTGTGAGAACTTTTTGAAAGCAGCATATGATCCTCGTATTTCTGGTGTCTATCTCCATATTGATATTTTGAGTTGTGGGTGGGGTAAAGTAGAAGAAATTCGAAGGCACATACTGAACTTCAAACAGTCAGGAAAATTTGTTGTGGCTTATGTCCCTTCATGCCAGGAAAAAGAATACTACCTTGCTTGTGCCTGTGACGAGATATATGCACCTCCAAGTGCCTATTTTTCTCTGTTTGGCTTGACTGTTCAAGCCTCATTCCTGAGGGGTGTTTTAGATAACATAGGGATTGAACCACAAGTGGAAAGGATTGGCAAATACAAAAGCGCCGGGGATCAACTGGCTCGCAGAACCATATCTGAGGCAAATAGTGAAATGCTGACTGCATTGCTTGATAATATCTACACAAATTGGCTGGATAAAGTTTCCTCTGCAAAAGGAAAAGAAAGAGAAGCTATTGAGAACTTTATAGATGAAGGAGTCTATCAAGTAGACAAGCTGAAAGAAGAGGGCTTTTTAACTAACATTATCTATGATGATGAGGTTATTTCCATGTTGAAAGAGAGACTTGGAGTGGAAACAGATAAGGATCTTCCTATGGTGGATTACAGAAAGTATTCCAGAGTTCGGAAATGGACTGTTGGAATATCAGGTGGTAAGGAGTTGATAGCTCTCGTCCGGGCCTCGGGGAGTATTAGCCGTATTGAAAGTCCATTAAGTGTGTCAGGCTCAGGGATTGTTGGGGAGAAGTTTATTGAGAAGATTCGCAGTGTCAGAGAGTCCAAAAAATATAAGGCAGCTATTATCCGAATTGACAGTCCTGGAGGTGATGCCCTTGCGTCTGATCTGATGTGGAGAGAAATCAGACTTTTGGCTGCTAAAAAACCAGTCATTGCTTCAATGTCTGATGTGGCGGCAAGTGGAGGATATTATATGGCAATGGCAACAGGAACTATTGTTGCAGAAAGCCTTACTTTAACTGGTTCAATTGGAGTGGTTACAGGAAAATTTAACCTGGGTAAACTGTACGAGAAGATTGGATTTAATAAAGAAATCATATCAAGGGGAAGATATGCTGAGCTACTTGCAGCAGAACAACGGCCTTTCAGACCGGATGAAGCCGATTTATTTTCCAAGTCCGCACAGAATGCTTACAAGCAATTTCGTGATAAGGCAGCATTTTCCAGATCCATGACTGTAGATAAGATGGAGGAGGTTGCACAGGGGAGAGTTTGGACCGGTAAAGATGCAGCTGCATGCGGTTTGGTTGATGCTATTGGTGGGCTTTCTCGTGCAATTGCCATAGCAAAATCCAAGGCCAACATACCTCAAGACGAACAGGTTACAATTGTGGAGCTTTCAAGAACCAGCCCTTCCCTACCAGAGGTTTTAAGTGGCATTGGGAGTACCCTAGCCGGAGTGGACAGAACATTGAAGGATCTGTTACAAAGCTTGACACTTTCTGATGGGGTTCAAGCCCGAATGGATGGAATCATGTTTGAGAGATTGGAAGGATATCCTTACGCCAATCCCATATTGACATTGATAAAAGATTACCTTAGTTCCCTCTAG 2040 0.4294 MSKLLLHSSHLTFVHRFITFPPSTASFSRLHFRNRSFVSISSQSNLRRIFPFHSRGDLSVCAFDSSSSETKDEEEASGKDGINNQFVKTSDEDYPTGEFEFQPITGWRGFLVKLKMLIAFPWERVRKGSVLTMKLRGQISDQVKSRFSRGLSLPQICENFLKAAYDPRISGVYLHIDILSCGWGKVEEIRRHILNFKQSGKFVVAYVPSCQEKEYYLACACDEIYAPPSAYFSLFGLTVQASFLRGVLDNIGIEPQVERIGKYKSAGDQLARRTISEANSEMLTALLDNIYTNWLDKVSSAKGKEREAIENFIDEGVYQVDKLKEEGFLTNIIYDDEVISMLKERLGVETDKDLPMVDYRKYSRVRKWTVGISGGKELIALVRASGSISRIESPLSVSGSGIVGEKFIEKIRSVRESKKYKAAIIRIDSPGGDALASDLMWREIRLLAAKKPVIASMSDVAASGGYYMAMATGTIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGRYAELLAAEQRPFRPDEADLFSKSAQNAYKQFRDKAAFSRSMTVDKMEEVAQGRVWTGKDAAACGLVDAIGGLSRAIAIAKSKANIPQDEQVTIVELSRTSPSLPEVLSGIGSTLAGVDRTLKDLLQSLTLSDGVQARMDGIMFERLEGYPYANPILTLIKDYLSSL 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0799 679 PANTHER PROTEASE 4 88 678 - -
Mibi13g0799 679 Gene3D - 128 271 - -
Mibi13g0799 679 Gene3D - 272 364 - -
Mibi13g0799 679 CDD S49_Sppa_N_C 379 593 IPR002142 GO:0006508|GO:0008233
Mibi13g0799 679 PIRSF Protease_4_SppA 60 679 IPR004634 GO:0006465|GO:0008233|GO:0016020
Mibi13g0799 679 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 395 593 IPR004635 GO:0006508|GO:0008233
Mibi13g0799 679 MobiDBLite consensus disorder prediction 69 88 - -
Mibi13g0799 679 Pfam Peptidase family S49 196 348 IPR002142 GO:0006508|GO:0008233
Mibi13g0799 679 Pfam Peptidase family S49 447 598 IPR002142 GO:0006508|GO:0008233
Mibi13g0799 679 Gene3D - 375 522 - -
Mibi13g0799 679 CDD S49_SppA_67K_type 131 344 - -
Mibi13g0799 679 SUPERFAMILY ClpP/crotonase 120 336 IPR029045 -
Mibi13g0799 679 Gene3D - 530 647 - -
Mibi13g0799 679 SUPERFAMILY ClpP/crotonase 403 584 IPR029045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0799 Mibi-ChrMibi13 10178891 10186370 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0023 09 539715 549362 Mibi13g0799 13 10178891 10186370 CCT