Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0023 ATGTGGAAGCTGCTTCTCCACACCACCTCCCGTCGTAGCTCCTTTCGGCGTTCCTTGGAATTTGTCGTGGCTACTCTTTCCTCTCCTTCTTCCATTTCTCATTCCCCATCCCAATGCCTCCTCTACCCCTCTCACTCCCTTGTCGCCTTCCATTCAAAATCCAAACTTGAGGCGAAAATCAATGCCAGTGCTAGATTTGCCGATGACGATTATCCCACCGGCGACTTTGATTTTGCGCCCATTACTGGGTGGAGGAAATTCCTTCTCAAGCTCAAGACGCTCATTGCATTCCCTTTGGAGGGCGTTCGCAACGGAAGCCTTCTCACTCTCAAGCTGCGCGGCCGGATATCTGATCAGCTCAAGGCTCCTTTCTCCCAAGGACTATCTCTACCTCAAATTTGTGAGAACCTCTCAAAGGCAGCATATGATCCTCGTATCTCTGGTATCTACCTCCATATTGATAATTTAAACTGTGGATGGGGTAAAGTTGAAGAAATTCGAAGACACATACTGAATTTCAAAAGATCTGGAAAATTTGTTGTGGCTTATGTCCCTTCATGCCGAGAAAAAGAATATTATCTTGCATGTGCGTGTGAAGAAATATACGCCCCTCCAAGTGCTTATTTTTCATTGTTTGGATTCACCGTTCAAGCATCATTCCTCAGAGGTGTTTTAGATAACATAGGGATCGAACCTCAAGTTGAAAAGATTGGGAAATACAAAAGTGCAGGGGATCACCTAACCCGTAGAACCATGTCTGAAGAAACTTATGAGATGATGACTGAACTGCTTGAAAATATTTATGGGAATTGGCTAGATGAAGTCTCTTCTTCAAGAGGAAAAAAGAGAGAGGAGATTGAGAATTTCATAAATGAAGGAGTCTATCAAGTAGACAGGTTGAAAGAAGAAGGCTTCATTACAAACATAATGTATGAGGATGAGGTTATTGCTAAGTTGAAGGAGAGACTTGGATTGAAAACAAATGAAAGCCTATGTATGGTGGATTACAGGAAGTACTGTAGAGTTAAGAGATGGACGGTTGGAATATCAGGTAGTAAAGACCTGATAGCCATCATACGTGCCTCCGGGAGCATTAGTCGTGTCAAGACTCCATTGAGTGCGTCTAGATCGGGCATTATTGCTGAGCAGTTTATCGAGAAGATTCGCAAAGTAAGAGTGTCCAAACAATATAAGGCTGCTATTATCCGAATTGATAGTCCTGGTGGTGATGCCCTTGCTTCAGATTTAATGTGGAGAGAAATCAGACTTTTGGCTGCCTCTAAACCAGTCATTGCCTCATTGTCTGATGTTGCAGCAAGTGGAGGTTATTACATGGCAATGGGAGCTGGGACTATTGTAGCTGAAAGTCTTACCTTGACTGGATCAATTGGAGTGGTCACAGGAAAATTTAACTTGGGGAAACTGTATGAGAAGATTGGCTTCAACAAGGAAATTATATCTAGGGGAAAATATGCCGAAGTCCTTGCTGCTGAACAACGTCCTTTTAGACCTGACGAAGCAGAGCTGTTTGCCAAGTCTGCACAGCATATTTATAAACAGTTTCGAGATAAGGCTGCTTTTTCGAGATCAATGACTGTAGAAAGGATGGAGGAGGTTGCACAAGGTAGAGTTTGGACTGGTAAAGCCGCAGCTTCACATGGTTTAGTTGATGCTATTGGTGGTCTTTCTCGAGCTATTGCCATAGCAAAATTGAAGGCCAATATACCTCAAGATAGACAGGTTACTCTTGTGGAACTTTCCCGGCCTTCTCTTCCAGAGATTTTAAGTGGCGCAGGGAATGCCCTGGTTGAAGTGGATAACACAATGGAGGAACTGCTTCAGGATTTGACATTTTCTGATGGAGTTCAGGCACGGATGGATGGAATCATGCTTGAGAGATTGGAAGGATATCCTCACCCCAACCCCACTTTGAGGCTGATGAAGGAGTTCCTGAGTTCCCTGTAG 1965 0.4382 MWKLLLHTTSRRSSFRRSLEFVVATLSSPSSISHSPSQCLLYPSHSLVAFHSKSKLEAKINASARFADDDYPTGDFDFAPITGWRKFLLKLKTLIAFPLEGVRNGSLLTLKLRGRISDQLKAPFSQGLSLPQICENLSKAAYDPRISGIYLHIDNLNCGWGKVEEIRRHILNFKRSGKFVVAYVPSCREKEYYLACACEEIYAPPSAYFSLFGFTVQASFLRGVLDNIGIEPQVEKIGKYKSAGDHLTRRTMSEETYEMMTELLENIYGNWLDEVSSSRGKKREEIENFINEGVYQVDRLKEEGFITNIMYEDEVIAKLKERLGLKTNESLCMVDYRKYCRVKRWTVGISGSKDLIAIIRASGSISRVKTPLSASRSGIIAEQFIEKIRKVRVSKQYKAAIIRIDSPGGDALASDLMWREIRLLAASKPVIASLSDVAASGGYYMAMGAGTIVAESLTLTGSIGVVTGKFNLGKLYEKIGFNKEIISRGKYAEVLAAEQRPFRPDEAELFAKSAQHIYKQFRDKAAFSRSMTVERMEEVAQGRVWTGKAAASHGLVDAIGGLSRAIAIAKLKANIPQDRQVTLVELSRPSLPEILSGAGNALVEVDNTMEELLQDLTFSDGVQARMDGIMLERLEGYPHPNPTLRLMKEFLSSL 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0023 654 Gene3D - 106 243 - -
Mibi09g0023 654 Gene3D - 246 341 - -
Mibi09g0023 654 PIRSF Protease_4_SppA 19 653 IPR004634 GO:0006465|GO:0008233|GO:0016020
Mibi09g0023 654 PANTHER PROTEASE 4 61 653 - -
Mibi09g0023 654 Pfam Peptidase family S49 173 325 IPR002142 GO:0006508|GO:0008233
Mibi09g0023 654 Pfam Peptidase family S49 424 574 IPR002142 GO:0006508|GO:0008233
Mibi09g0023 654 Gene3D - 350 495 - -
Mibi09g0023 654 SUPERFAMILY ClpP/crotonase 349 561 IPR029045 -
Mibi09g0023 654 CDD S49_SppA_67K_type 108 321 - -
Mibi09g0023 654 CDD S49_Sppa_N_C 356 570 IPR002142 GO:0006508|GO:0008233
Mibi09g0023 654 Gene3D - 496 624 - -
Mibi09g0023 654 SUPERFAMILY ClpP/crotonase 103 312 IPR029045 -
Mibi09g0023 654 TIGRFAM SppA_dom: signal peptide peptidase SppA, 36K type 356 569 IPR004635 GO:0006508|GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0023 Mibi-ChrMibi09 539715 549362 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0023 09 539715 549362 Mibi13g0799 13 10178891 10186370 CCT
Mibi09g0023 09 539715 549362 Mibi09g0023 09 539715 549362 ECH