Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi13g0613 ATGCCACGTGGCAGCTTGGTTGGTGAAGAGAAGTCGCCTTCCTTCTTCCTGAATGTGGTTTCTGAAGAAGTAAAGATGCCAGGAATCCTTACAAATGGATTTGAACATAATGAAAGAGCAAATGAAATGAACGGAAATCCTTCCACTTGTAAGGAATTCGCTACTCCAATCAAGTGCCAAAGGGGTTCTTTTAGTCCACAAAGTCCTCAGAACACAGGTCCAGGTGAACCTATTCAACCACCGGTTGACACCTCAATCGAGCAGCTTTATGAAAATGTATGTGACATGGAAAGTTCTGATCACTCACCTTCCAGACAAAGTCTCAGATCTGATGGTGATGAGTCTAGGATCGATTCAGAATTGTGTCATCTAGTTGGTGGACCGATGAGGGAAGTGGAAATCATGGAAGAGGAAATGGCAGAGGAGTCAAGACGTGATTCCGTTAGCGAAACATCTTCTAGAAAAGAAACATCAGCAAATGGTGAGAAGTTGGAACAGGCAGATGAGAATATTCAATGTGAGAAGTTGGAAAAAGCCAATCAGAAGATTGAATCTGAGAAGTTGGTTCAGGAGGATGAGAAGATTCAATGTGAGAAGTTGGTGCAGGCAGATGAGAACGTTCAATCTGCTAATACAAGATCTGCTTCTCCAGATAATTCAAACAAAGTGTCAAACTCACAGGTGGACCTTATCCCTGAAACACCGCCAGAGTCAAAACCCAAGGGAAAAAATTCTCCCAAGCCTCCTACTGATAAGAGGAATGGTAAAGCTCTGAAAAAACAAAATAACGGAGCTACTCGTGTGAAAAAATCAAAGAAATCTCCTATTAAAAGGTTGATATCAAGAAATCAGAGCGAGGATTCCACTGAATCTACACCAGGCAAGCCGGAGATGGGGCAGGTTTTACTAAAGCAAGCGAGAGATTTGATTTCAACGGGAGATAATCCAAGGAAGGCTCTTGAATTATCTCTTCGAGCAATGAGATTGTTTGAGAAGTATGCTGATGGAAAACCAAGTTTGGAACTAGTAATGTGCCTGCATGTTACTGCGGCAATACATTCCAGCTTGGGCCAATACCATGAGGCAATCCCACTTCTTGAGCACTCCATTGAAGTTCCTCTCATTGAGGAAGGGCAAGATCACGCCCTCGCGAAGTTTGCTGGTCACATGCAATTAGGCGATACCTATGCAATGTTGGGCCAGCTTGAAAATTCAATTATGTGCTACACCACAGGGTTGGAAGTCCAGAGGAAAGTCTTGGGAGAAACAGACCCGAGATTTGGCGAAACGTGCAGGTATGTGGCTGAAGCACATGTTCAAGCGTTGCAATTCAACGAAGCCGAGAGGCTCTGCCAAATGGCTCTTGACATTCATAGAGAAAATGGTTCGCCTCCTTCTCTTGAAGAGGTGGCTGATAGGAGGCTCATGGGCCTCATATGTGAAACAAAAGGAAACCATGAAGAAGCTCTTGAGCATTTAATTTTAGCCAGCATGGCAATGGTAGCTAATGGCCAGGAAGTGGAAGTGGCATCTGTTGATAGCAGCATTGGAGACACGTACTTATCTTTGTCTCGGTATGACGAAGCTATTTTTGCTTATCAGAAAGCACTCACGGTTTTTAAGACCAGCAAAGGAGAGAATCATCCGGCCGTGGGATCAATCTTTGTACGTTTGGCTGATTTGTATAACAAGACAGGGAAGATAAGGGAATCAAAATCCTACTGTGAGAATGCACTTAGAATATATGAAAAACCTATGCCTGGGGTCCCTCCTGAGGAGATTGCAAGTGGTCTTATGGATATTTCAGCTATCTATGAGTCAATGAATGAGCTTGATCAGGCACTCAAGTTACTTCCCAAGGCACTAGAGATATATAAGGATGCCCCTGGCCGTCAAAGCACAGTAGCAGGAATCGAAGCTCAGATGGGAGTCTTGCACTACATGTTGGGAAACTATTCTGAATCTTACAACACTTTGAAGAATGCCATCTCAAAGCTTCGTGCTACCGGAGAAAAGAAAACAGCTTTCTTTGCGGTCGCTCTTAATCAAATGGGACTTGCTTGTGTGCAGCGCTATGCATTGGGTGAGGCTACAGAACTGTTTGAAGAAGCAAAGAATATATTTGAACAAGAGTATGGACCCTATCACCATGAAACGCTTGGGGTGTATAGCAATCTTGCTGGCACCTATGATGCAATAGGCAGGGTGGATGAGGCAATTCAGATTCTGGAGTATGTAGTTGGAATGAGAGAGGAAAAACTTGGGACAGCAAATCCTGATGTGGATGATGAGAAAAGAAGGCTGAGTGAATTGTTGAAGGAAGCTGGTAGAGTTAGGAGCAGAGAGGGCAGATCACTTGAGACCCTTCTTGATGCCAATAATGCTTCTACTTCTGAAAACACAGTAATATAG 2412 0.4374 MPRGSLVGEEKSPSFFLNVVSEEVKMPGILTNGFEHNERANEMNGNPSTCKEFATPIKCQRGSFSPQSPQNTGPGEPIQPPVDTSIEQLYENVCDMESSDHSPSRQSLRSDGDESRIDSELCHLVGGPMREVEIMEEEMAEESRRDSVSETSSRKETSANGEKLEQADENIQCEKLEKANQKIESEKLVQEDEKIQCEKLVQADENVQSANTRSASPDNSNKVSNSQVDLIPETPPESKPKGKNSPKPPTDKRNGKALKKQNNGATRVKKSKKSPIKRLISRNQSEDSTESTPGKPEMGQVLLKQARDLISTGDNPRKALELSLRAMRLFEKYADGKPSLELVMCLHVTAAIHSSLGQYHEAIPLLEHSIEVPLIEEGQDHALAKFAGHMQLGDTYAMLGQLENSIMCYTTGLEVQRKVLGETDPRFGETCRYVAEAHVQALQFNEAERLCQMALDIHRENGSPPSLEEVADRRLMGLICETKGNHEEALEHLILASMAMVANGQEVEVASVDSSIGDTYLSLSRYDEAIFAYQKALTVFKTSKGENHPAVGSIFVRLADLYNKTGKIRESKSYCENALRIYEKPMPGVPPEEIASGLMDISAIYESMNELDQALKLLPKALEIYKDAPGRQSTVAGIEAQMGVLHYMLGNYSESYNTLKNAISKLRATGEKKTAFFAVALNQMGLACVQRYALGEATELFEEAKNIFEQEYGPYHHETLGVYSNLAGTYDAIGRVDEAIQILEYVVGMREEKLGTANPDVDDEKRRLSELLKEAGRVRSREGRSLETLLDANNASTSENTVI 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi13g0613 803 SUPERFAMILY TPR-like 429 586 IPR011990 GO:0005515
Mibi13g0613 803 MobiDBLite consensus disorder prediction 204 232 - -
Mibi13g0613 803 SMART tpr_5 678 711 IPR019734 GO:0005515
Mibi13g0613 803 SMART tpr_5 552 585 IPR019734 GO:0005515
Mibi13g0613 803 SMART tpr_5 428 461 IPR019734 GO:0005515
Mibi13g0613 803 SMART tpr_5 510 543 IPR019734 GO:0005515
Mibi13g0613 803 SMART tpr_5 720 753 IPR019734 GO:0005515
Mibi13g0613 803 SMART tpr_5 636 669 IPR019734 GO:0005515
Mibi13g0613 803 SMART tpr_5 470 503 IPR019734 GO:0005515
Mibi13g0613 803 SMART tpr_5 595 628 IPR019734 GO:0005515
Mibi13g0613 803 SMART tpr_5 386 419 IPR019734 GO:0005515
Mibi13g0613 803 Pfam Tetratricopeptide repeat 598 631 - -
Mibi13g0613 803 MobiDBLite consensus disorder prediction 244 258 - -
Mibi13g0613 803 MobiDBLite consensus disorder prediction 130 172 - -
Mibi13g0613 803 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 187 793 - -
Mibi13g0613 803 Gene3D Tetratricopeptide repeat domain 285 497 IPR011990 GO:0005515
Mibi13g0613 803 Coils Coil 164 193 - -
Mibi13g0613 803 ProSiteProfiles TPR repeat profile. 510 543 IPR019734 GO:0005515
Mibi13g0613 803 MobiDBLite consensus disorder prediction 263 277 - -
Mibi13g0613 803 Gene3D Tetratricopeptide repeat domain 498 669 IPR011990 GO:0005515
Mibi13g0613 803 Gene3D Tetratricopeptide repeat domain 670 787 IPR011990 GO:0005515
Mibi13g0613 803 MobiDBLite consensus disorder prediction 102 120 - -
Mibi13g0613 803 Pfam Tetratricopeptide repeat 678 746 - -
Mibi13g0613 803 Pfam Tetratricopeptide repeat 509 584 - -
Mibi13g0613 803 SUPERFAMILY TPR-like 516 746 IPR011990 GO:0005515
Mibi13g0613 803 SUPERFAMILY TPR-like 314 463 IPR011990 GO:0005515
Mibi13g0613 803 MobiDBLite consensus disorder prediction 58 172 - -
Mibi13g0613 803 ProSiteProfiles TPR repeat profile. 595 628 IPR019734 GO:0005515
Mibi13g0613 803 Coils Coil 761 781 - -
Mibi13g0613 803 MobiDBLite consensus disorder prediction 204 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi13g0613 Mibi-ChrMibi13 8051499 8055002 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0253 09 3133021 3135492 Mibi13g0613 13 8051499 8055002 CCT
Mibi09g0253 09 3133021 3135492 Mibi13g0613 13 8051499 8055002 ECH
Mibi13g0613 13 8051499 8055002 Mibi13g0613 13 8051499 8055002 ECH