Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0253 ATGCCGGGAGTGACTGGTAATGGGGTTCCTGATGAGGGGAAGGCAAATGAAAGGAATATAAATCCTTCTCCCTCTAACTCTAAGGAGGCCTCAAACCCAAGTGAGTCAAAACATCCTGAGAGTACAGGTGTTGATGGTGCCGTTGAAACCTCTATCGATCAGCTTTATGAAAATGTGTATGACATGCAAAGTTCTGATCGGTCTCCGTCGAGGCAAAGCTTTGGATCTGATGGTGATGAGTCCAGGATTGATTCAGAATTGCATCATCTAGTTGGAGGGCAGATGAGGGAGGTGGAGATAATGGAAGAGGAAATGGAGGAAAAGCAAGGCGGTAATGGAAGTAGCAAAGCATCTTCTAGAAAGGGTAGTTTGTCATATGATAGGAAGGTGGACAATGTGGGTGAGATTCAACCTGCAAGTAGCAGTTCTGGCACTTCTCAAAAACCAAACAAGCCGTCCAATGCAAAATTACAATCCAAGACAGCACTAAAATCAAAACCCAAAGTCAAAAGTCCTCCTGTGAAGCCTTCTTTTGAGAGAAAGAATGATAAGCCTTTGAAAAAACAAAGCACAGGTGTTGTTAGCTCGAAGAAATCACAAATTGTTCCTCCTGGAAGGTCAGTGTCACAGAGTCGTGCCAAGAATTCAGTTGAACCAGCATCAGATAAGCCAGAGATGGGACCGATTTTGCTCAAGCAGGCAGCAGATCAGATGTCATCAGGGGATAATCCGCAGAAGGCACTTGAATTAGCCCTTCGGTCAACAAAAGTGTTTGAGAAGTATGCTGGTGAGAAACCAAGTTTGGACCTTGTCATGAGCTTACATGTTTCAGCAGCAATATACTGTAGCATGGGTCAATACAAGGATGCGGTTCCAGTTCTTGAGCGCTCTATTGAGATTCCTGTTATTGAGGAAGGCGAGGACCATGCACTGGGTAAATTTGCTGGTCTGATGCAACTGGGCGACACATATGCGATGCTGGGCCAGCTTGAGAATGCAATTATGTCCTACACCAAGGGTTTGGAAGTTCAGAAACAGATTTTGGGAGAAACCGATCAGAGAGTTGGTGAAACTTGTCGGTATCTTGCTGAAGCTCATGTTCAAGCATTGCAATTTGATGAGGCTGAGAGGCTCTGTCAAATGGCTTTGGACATTCATAAAGCAAGAGATTCACCTCCTTCTCTTGAAGAGGCAGCTGATAGGAGGCTCATGGGCCTTATATGTGAAACAAAGGGAAAGCATGAAGCAGCTTTAGAGCATCTTGTTTTAGCAAGCATGGCTATGGTGGCAAATGGGCAAGAAGCGGAAGTGGCATCCGTTGATTGTAGCATTGGAGACACGTATCTATCCTTGGCTCGATATGATGAGGCTATTTTTGCTTATCAAAAAGCACTTACAGCTTTCAAGGCCAGTAAAGGAGAGAATCATCCCTCCGTGGCTTTGGTTTTTGTCCGTTTAGCTGACTTGTATAAGAGGACAGGGAAGATAAAGGAATCCAAATCTTACTGTGAGAGTGCACTTAAAATCTATGAGAAGCCTCTTCCAGGGGTCCTTCTCGAGGATATTGCAAGTGGTCTCACTGATGTTTCCGCTATGTACGAGTCAATGAATGAGCTTGAACAGGCACTCAATCTACTGAAGAAGGCATTGGATATATATAACAATGCTCCTGGTCAGCAAAGCACAATAGCAGGAATTGAAGCTCAGATGGGGGTATTGTACTACATTGTAGGAGACTATAATGAATCTTACAACGCTTTCAAGAATGCTATCACAAAACTCCGTGCTATTGGAGAGAAGAGATCAGCCTTCTTTGGCATTGCTCTTAATCAAATGGGACTTTCCTGCGTGCAGCTTTACGCCTTAACTGAGGCTGCCAAATTGTTTGAAGAGTCAAAGAGTATTTTGGAACAAGAGTATGGACCATGTCACCCAGAAACGCTTGGCGTGTATAGCAATCTTGCCGGCACATATGATGCACTTGGAAGGTTGGATGATGCAATTGAGATTCTGGAGTATATTGTTAGTTTAAGGGAGGAAAAACTCGGGACTGCGAATCCTGATGTTTATGATGAGAGGAGAAGGTTGAGTGAATTGTTGAAGGAAGCAGGTAGAGTTCGGAACAGAAAATCAATATCACTGGAACGCCTTCTTGATTCCAATATTTATGCTCTGAACAATTTTGTCATGAGGATGGCTAGCTAG 2205 0.439 MPGVTGNGVPDEGKANERNINPSPSNSKEASNPSESKHPESTGVDGAVETSIDQLYENVYDMQSSDRSPSRQSFGSDGDESRIDSELHHLVGGQMREVEIMEEEMEEKQGGNGSSKASSRKGSLSYDRKVDNVGEIQPASSSSGTSQKPNKPSNAKLQSKTALKSKPKVKSPPVKPSFERKNDKPLKKQSTGVVSSKKSQIVPPGRSVSQSRAKNSVEPASDKPEMGPILLKQAADQMSSGDNPQKALELALRSTKVFEKYAGEKPSLDLVMSLHVSAAIYCSMGQYKDAVPVLERSIEIPVIEEGEDHALGKFAGLMQLGDTYAMLGQLENAIMSYTKGLEVQKQILGETDQRVGETCRYLAEAHVQALQFDEAERLCQMALDIHKARDSPPSLEEAADRRLMGLICETKGKHEAALEHLVLASMAMVANGQEAEVASVDCSIGDTYLSLARYDEAIFAYQKALTAFKASKGENHPSVALVFVRLADLYKRTGKIKESKSYCESALKIYEKPLPGVLLEDIASGLTDVSAMYESMNELEQALNLLKKALDIYNNAPGQQSTIAGIEAQMGVLYYIVGDYNESYNAFKNAITKLRAIGEKRSAFFGIALNQMGLSCVQLYALTEAAKLFEESKSILEQEYGPCHPETLGVYSNLAGTYDALGRLDDAIEILEYIVSLREEKLGTANPDVYDERRRLSELLKEAGRVRNRKSISLERLLDSNIYALNNFVMRMAS 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0253 734 MobiDBLite consensus disorder prediction 135 165 - -
Mibi09g0253 734 MobiDBLite consensus disorder prediction 173 187 - -
Mibi09g0253 734 Pfam MalT-like TPR region 280 388 IPR041617 -
Mibi09g0253 734 MobiDBLite consensus disorder prediction 1 225 - -
Mibi09g0253 734 Gene3D Tetratricopeptide repeat domain 425 603 IPR011990 GO:0005515
Mibi09g0253 734 ProSiteProfiles TPR repeat profile. 523 556 IPR019734 GO:0005515
Mibi09g0253 734 Gene3D Tetratricopeptide repeat domain 604 719 IPR011990 GO:0005515
Mibi09g0253 734 Pfam Tetratricopeptide repeat 607 672 - -
Mibi09g0253 734 Pfam Tetratricopeptide repeat 437 512 - -
Mibi09g0253 734 Gene3D Tetratricopeptide repeat domain 315 424 IPR011990 GO:0005515
Mibi09g0253 734 SUPERFAMILY TPR-like 435 555 IPR011990 GO:0005515
Mibi09g0253 734 MobiDBLite consensus disorder prediction 56 76 - -
Mibi09g0253 734 SUPERFAMILY TPR-like 268 419 IPR011990 GO:0005515
Mibi09g0253 734 MobiDBLite consensus disorder prediction 188 217 - -
Mibi09g0253 734 MobiDBLite consensus disorder prediction 18 39 - -
Mibi09g0253 734 MobiDBLite consensus disorder prediction 77 110 - -
Mibi09g0253 734 SUPERFAMILY TPR-like 563 706 IPR011990 GO:0005515
Mibi09g0253 734 Gene3D Tetratricopeptide repeat domain 222 314 IPR011990 GO:0005515
Mibi09g0253 734 Coils Coil 529 556 - -
Mibi09g0253 734 ProSiteProfiles TPR repeat profile. 438 471 IPR019734 GO:0005515
Mibi09g0253 734 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 34 721 - -
Mibi09g0253 734 SMART tpr_5 648 681 IPR019734 GO:0005515
Mibi09g0253 734 SMART tpr_5 523 556 IPR019734 GO:0005515
Mibi09g0253 734 SMART tpr_5 564 597 IPR019734 GO:0005515
Mibi09g0253 734 SMART tpr_5 606 639 IPR019734 GO:0005515
Mibi09g0253 734 SMART tpr_5 271 304 IPR019734 GO:0005515
Mibi09g0253 734 SMART tpr_5 438 471 IPR019734 GO:0005515
Mibi09g0253 734 SMART tpr_5 480 513 IPR019734 GO:0005515
Mibi09g0253 734 SMART tpr_5 356 389 IPR019734 GO:0005515
Mibi09g0253 734 SMART tpr_5 314 347 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0253 Mibi-ChrMibi09 3133021 3135492 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0253 09 3133021 3135492 Mibi13g0613 13 8051499 8055002 CCT
Mibi09g0253 09 3133021 3135492 Mibi13g0613 13 8051499 8055002 ECH
Mibi09g0253 09 3133021 3135492 Mibi09g0253 09 3133021 3135492 ECH