Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1342 ATGATAAACAAAACGAGAAATTCGAATTCCCATCTACACGATCCATTCAATGAGATGTTTTTTTTTTTTTTTTTTTTTTTGGGTTTCTCGTTGGCCGTTGATTCCATCTTTCCCCGACAAATGAACGGTGGCGATGAGGTCGTCGCAGCTCCGGTGGGCCCACCACAGCCGCTGGAGTGGAAATTCTCTCAGGTTTTTGGTGAACGTACGGCCGGGGAGGAAGTTCAGGAAGTGGACATAATATCTGCCATTGAATTTGACAAGTCTGGTGATCATCTTGCTACTGGTGACCGTGGTGGTCGGGTGGTTCTATTTGAGAGGACAGATGCGAAAGATAATGGATCATCAAGAAGGGATTTGGAAAGGATGGATTATACAATAAGTAGGCATCCTGAGTTTCGATATAAAACTGAGTTTCAGAGTCATGAACCTGAGTTCGATTATCTCAAGAGCTTGGAAATTGAAGAGAAAATAAACAAAATCAGATGGTGCCAAACAGCTAATGGTGCCTTGTTTCTTCTATCTACAAACGATAAAACCATCAAATATTGGAAGGTTCAAGAAAAGAAGGTCAAGAAAATATCTGAGATGAATGTCGACCCATCTAAAGCAATGGCAAATGGCTGTATTGGCAGTATTGCTAGTTCCAGTAGTTCGAGTAGCCCTAGGCCATATCTTGCAAATGGAGGATCTCCAGATAAATCATACAATTATCTGACCAATGACTTATCATTTCCACCTGGGGGCATCCCATCATTAAGATTACCTGTGGTAACGAGCCATGAGACCAGCCTTGTAGCTCGATGCCGTAGAGTATACGCCCATGCTCATGATTATCATATCAATTCTATATCAAGTAACAGTGATGGCGAAACTTTCATATCTGCTGATGATCTGCGGATAAATCTGTGGAACTTAGAAATTAGCAATCAAAGTTTTAATATTGTAGATGTAAAGCCTGCAAACATGGAGGATCTGACTGAGGTTATAACATCAGCTGAGTTTCACCCTACCCATTGTAATATGTTGGCCTATAGCAGTTCAAAGGGCTCAATCCGTCTTGTGGATATGCGCCAATCAGCATTGTGTGATACTCATGCTAAATTATTTGAGGAGCAGGAGGCGCCGGGGTCCAGATCGTTTTTTACAGAGATTATTGCTTCGATTTCAGATATAAAATTTGGGAAGGATGGAAGATACATACTTAGTCGTGATTACATGACTCTAAAGTTGTGGGACATTAATATGGACTCTGGCCCAGTTGCAACTTTCCAGGTTCATGAATATCTAAGACCAAAGCTATGTGACTTGTATGAAAATGATTCAATTTTTGATAAGTTCGAGTGCTGTTTGAGTGGCGATGGGTTGCGTGTAGCAACTGGTTCTTACAGCAACCTATTCCGTGTGTTCGGCTGCAACCCAGGAAGTACTGAGGCTACAACCTTGGAAGCTAGTAAAAATCCAATGAGGCGACAAGTTCAAGCCCCTGCAAGGCCAGCTAGATCACTGGGAAGTAGTTTGACTCGAGTTGTAAGGCGAGGATCTGAAAGTCCGGGTGTTGATGCAAATGGGAACTCTTTTGATTTCACTACAAAGTTGCTGCACTTGGCATGGCACCCAACCGAAAATTCGATTGCCTGTGCTGCTGCAAATAGTTTGTACATGTACTATGCATAA 1677 0.4222 MINKTRNSNSHLHDPFNEMFFFFFFFLGFSLAVDSIFPRQMNGGDEVVAAPVGPPQPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVVLFERTDAKDNGSSRRDLERMDYTISRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRWCQTANGALFLLSTNDKTIKYWKVQEKKVKKISEMNVDPSKAMANGCIGSIASSSSSSSPRPYLANGGSPDKSYNYLTNDLSFPPGGIPSLRLPVVTSHETSLVARCRRVYAHAHDYHINSISSNSDGETFISADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNMLAYSSSKGSIRLVDMRQSALCDTHAKLFEEQEAPGSRSFFTEIIASISDIKFGKDGRYILSRDYMTLKLWDINMDSGPVATFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGLRVATGSYSNLFRVFGCNPGSTEATTLEASKNPMRRQVQAPARPARSLGSSLTRVVRRGSESPGVDANGNSFDFTTKLLHLAWHPTENSIACAAANSLYMYYA 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1342 558 SUPERFAMILY WD40 repeat-like 79 550 IPR036322 GO:0005515
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 132 160 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 277 304 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 362 389 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 444 470 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 418 443 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 333 361 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 85 105 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 161 189 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 527 556 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 390 417 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 305 332 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 76 240 - -
Mibi11g1342 558 PIRSF PPA2_B55 53 558 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 55 558 IPR000009 GO:0000159|GO:0019888
Mibi11g1342 558 FunFam Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B 252 554 - -
Mibi11g1342 558 Gene3D - 111 556 IPR015943 GO:0005515
Mibi11g1342 558 Pfam WD domain, G-beta repeat 269 305 IPR001680 GO:0005515
Mibi11g1342 558 SMART WD40_4 375 413 IPR001680 GO:0005515
Mibi11g1342 558 SMART WD40_4 145 185 IPR001680 GO:0005515
Mibi11g1342 558 SMART WD40_4 71 106 IPR001680 GO:0005515
Mibi11g1342 558 SMART WD40_4 266 305 IPR001680 GO:0005515
Mibi11g1342 558 SMART WD40_4 417 471 IPR001680 GO:0005515
Mibi11g1342 558 SMART WD40_4 316 356 IPR001680 GO:0005515
Mibi11g1342 558 ProSitePatterns Protein phosphatase 2A regulatory subunit PR55 signature 1. 145 159 IPR018067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1342 Mibi-ChrMibi11 32297377 32306365 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1342 11 32297377 32306365 Mibi04g0557 04 10883211 10891403 CCT
Mibi04g0557 04 10883211 10891403 Mibi11g1342 11 32297377 32306365 ECH
Mibi11g1342 11 32297377 32306365 Mibi11g1342 11 32297377 32306365 ECH