Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g1179 ATGACCACAAAGCAACCCTCAGATCCATCAGATGGAACCTCATCTGAGAATTGGCTAGACGATGCATGCATTCTCGACATAGATTTCTTCGTAAAAACAGTCACAGGCATAAAATCAAAAGGCGTATGCGCAGATCTAATCGGATCAGTAATCACACACTACGCCTCCAAATGGCTCCCAGAACTCTCCTCAATCAACACCACACAACAAACCCTAACTCAATTCCAGGAATCGCCACAAAACTTCGCGATCTCATGGATGAAGAAGCGATTCCTAATCGAAACCCTAATTAGCGTCCTACCACAAGAGAAAAACTCGATCCCCTGCAATTTCCTCCTCAGGCTTTTGCGAACAGGGAACATGGTAGGAATCGAAGGGGAATTCAGATGCGAGTTAGAGAGAAGGATTTCGAGGCAATTGGAAGAGGCGTCGTTGAAGGAGATGATGATTCCTTCGTTTAGTAGTGATGATGATGATGCTGGTTGTAGTGGGACGTTGTTGGATGTGGAATTGGTGATTAGGTTGGTGAATGGGTTTGTGGAATTGGGAAGGGAGGGAGGGGATTTGGTGAAGGTGGGGAGGTTGGTGGATTTGTACCTAGCTGAGATCGCCATTGATGTGAATTTGAGGGTTTCTGAGTTTGTTAAGCTTGCTGATGCTCTTCCTCAACATGCAAGAGTTACTGATGATGCATTGTACAGAGCCATTGACACTTTTCTTAAAGCGCATGCAGGGATATCAAAGAAAGAAAGGAAGGGATTATGCAGACTAATAGATAGCACCAAACTCACATCAGAGGCATCACTTCATGCGGCTCAAAACGAACGCTTACCAGTCCGAGCAGTGTTACAAGTTCTCTTCTCCGAGCAAATTAAACAGAACCACCACCGCCGCCTGGAGTTATCGGAGCAAGCGGCGGCGAGGTTTGGATCAAAGCGAGAAGTGATGGAAATAAAGAAGCTAAAGGAAGAGGTAGTGAGGCTACAAAGCCAATGCAATGCCATGCAAGCACAGATAGAGAAGATGTCGGAGAAGAAGAAGACAGGCTTCTTCTGGTGGAAGAAGCACGCCATAATACCCGCCTGTACGGGCGGTGGAGGAGGTGGTGGCGGGTTAAGTAGGAGCGTTGAGATGAATAACAATGAAGCTGGTAGGGATAATGATGATGAGGATGGAATTGTGGGGTTTAGGAGACATACTCCTATGCACGTGAGGACGAGGTTGCTCAAGCATAATAAGACTCATCATCCCAAGTGGAGGAGATCCATGTCTTGA 1275 0.4651 MTTKQPSDPSDGTSSENWLDDACILDIDFFVKTVTGIKSKGVCADLIGSVITHYASKWLPELSSINTTQQTLTQFQESPQNFAISWMKKRFLIETLISVLPQEKNSIPCNFLLRLLRTGNMVGIEGEFRCELERRISRQLEEASLKEMMIPSFSSDDDDAGCSGTLLDVELVIRLVNGFVELGREGGDLVKVGRLVDLYLAEIAIDVNLRVSEFVKLADALPQHARVTDDALYRAIDTFLKAHAGISKKERKGLCRLIDSTKLTSEASLHAAQNERLPVRAVLQVLFSEQIKQNHHRRLELSEQAAARFGSKREVMEIKKLKEEVVRLQSQCNAMQAQIEKMSEKKKTGFFWWKKHAIIPACTGGGGGGGGLSRSVEMNNNEAGRDNDDEDGIVGFRRHTPMHVRTRLLKHNKTHHPKWRRSMS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g1179 424 PANTHER OS12G0117600 PROTEIN 16 355 IPR043454 -
Mibi11g1179 424 Pfam NPH3 family 17 268 IPR027356 -
Mibi11g1179 424 Coils Coil 311 345 - -
Mibi11g1179 424 ProSiteProfiles NPH3 domain profile. 16 292 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g1179 Mibi-ChrMibi11 29030001 29033524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g1179 13 291 EF-hand Containing Proteins AT3G44820 33.871 3.76e-47 169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1179 11 29030001 29033524 Mibi04g0767 04 16102221 16105762 CCT
Mibi11g1179 11 29030001 29033524 Mibi11g1179 11 29030001 29033524 ECH