Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g0767 ATGTTCACTGAAACAAACAACTCACAATCTCACCACCAAACAGAACAACCCATGATAGCGAAATCGCCGCCGCCGCACTTCTCGTCGGAATGTTGGTTCGACGACGCATGCATCCTTGACATGGACTACTTCGTCAAGACCCTCTCCGGCATCAAATCCAAAGGCGTCCGAGCCGACCTCGTCGGCTCCATCATCGTCCACTACGCCTCCAAATGGCTCCCGGAGCTCTCCTCCGGCGACCCCTCCGTCGCCGGCGCCGGCGCCGGAGACTCGCCGGAGAGCGCCACCGCCTCGTGGATGAAGAAGCGGTTCTTCGTCGAGACACTCATCGGGGTCCTTCCGCCGGAGAAGGACTCGGTCCCCTGCAATTTCCTCCTCCGGCTTCTCCGGACGGCGAACATGGTCGGTGTCGAAGGGAGCTATAAATCGGAGCTGGAGAAGAGGATAACGTGGCAGCTAGACGAGGCATCATTGAAGGAGATGATGATACCGTCGTTTAGTCACACGTGTGAGACATTGTTGGATGTTGGATTGGTGATAAGGTTGGTGAAGAGGTTTGTGGGGTTATTAGATAATATTAATGTTAATGTTAATGTTAATGTTGTTGATGGTGGAGGAGGGACAAGTAATAGTGGTGGTGGGGTTGTTGCTTTGATGAAAGTTGCTAAGTTGGTTGATGCTTACATGGCGGAAGCCGCCGTGGATGCTAATCTGAGGTTGCCGGAGTTTGTTGATCTCGCCGGAGCTCTTCCTCCTCATTCTAGAGCTACTCATGATGGCTTGTATAGAGCCATTGATACTTATCTTAAGGCACATCCAGGGGTAACAAAGCAAGAGAGGAAAGGTCTATGTAAGCTAATAGATTGTAGAAAACTAACCCCAGAAGCCTCACTCCATGCTGCTCAAAACGAACGTTTACCTGTAAGAGCTGTTATCCAAGTCCTGTTCTCCGAACAATCCAAGCTCAACCGCCACGTGGACTGGAGTGGCTCCTTTGCCGGTGGCACTAGAAGCCCCAACGGTGGCGATTTGCCGGCCCGGTCATTCTCCAAAAGGGAGATGTATGCACAACAAATGGAGATGAAGAAGCTAAAAGAAGATGTGTATAGGCTACAAAGTCAGTGTAGTGTGATGCAAGTTCAAATGGAGAGGATGATTGTGGAGAAGAGTAATAGTAATAATAATAAGAAGGGTTTTTTTAAGTGGAAGAGGTTTGGGATGAGTGGGTTTGGTAAGAGTGTGAATGTTATGGCTTCTTCTTCTTCTGTGGATCATCGTAAGATTGTTCATCATCATCAAGATGGGGTTGTTGTTGAAAGAGGAGGAGATAATGGTGATGATGATGATGGGTTTGATGATGTTAGTAGACAAACTCCTTTGGACATTAAAACTAGATCTTCTTCTCTTAAACCTCGTACGCCTCACAAGCACTGGAGAAAATCTATGTCTTGA 1452 0.4842 MFTETNNSQSHHQTEQPMIAKSPPPHFSSECWFDDACILDMDYFVKTLSGIKSKGVRADLVGSIIVHYASKWLPELSSGDPSVAGAGAGDSPESATASWMKKRFFVETLIGVLPPEKDSVPCNFLLRLLRTANMVGVEGSYKSELEKRITWQLDEASLKEMMIPSFSHTCETLLDVGLVIRLVKRFVGLLDNINVNVNVNVVDGGGGTSNSGGGVVALMKVAKLVDAYMAEAAVDANLRLPEFVDLAGALPPHSRATHDGLYRAIDTYLKAHPGVTKQERKGLCKLIDCRKLTPEASLHAAQNERLPVRAVIQVLFSEQSKLNRHVDWSGSFAGGTRSPNGGDLPARSFSKREMYAQQMEMKKLKEDVYRLQSQCSVMQVQMERMIVEKSNSNNNKKGFFKWKRFGMSGFGKSVNVMASSSSVDHRKIVHHHQDGVVVERGGDNGDDDDGFDDVSRQTPLDIKTRSSSLKPRTPHKHWRKSMS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g0767 483 Pfam NPH3 family 31 297 IPR027356 -
Mibi04g0767 483 MobiDBLite consensus disorder prediction 469 483 - -
Mibi04g0767 483 ProSiteProfiles NPH3 domain profile. 30 321 IPR027356 -
Mibi04g0767 483 MobiDBLite consensus disorder prediction 1 17 - -
Mibi04g0767 483 PANTHER OS12G0117600 PROTEIN 29 401 IPR043454 -
Mibi04g0767 483 MobiDBLite consensus disorder prediction 1 23 - -
Mibi04g0767 483 MobiDBLite consensus disorder prediction 432 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g0767 Mibi-ChrMibi04 16102221 16105762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g0767 29 340 EF-hand Containing Proteins AT3G44820 35.604 1.03e-51 184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g1179 11 29030001 29033524 Mibi04g0767 04 16102221 16105762 CCT
Mibi04g0767 04 16102221 16105762 Mibi04g0767 04 16102221 16105762 ECH