Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi11g0301 ATGTCCCTCCAAAACCCACCATTCAAAGACCTCCCTGACGCATCCCCAAAGCCAGACAACAACAAGAAAAGCTTCGTCACTTCTCTTATGGAAGCAGCCACACTCCGTACACCTTCCTTCAAAGAAGACACCTACTTTATCTCCCACCTCAAATCCTCCGAGAAGAAAGCCCTCCAAGACCTCAAGAACAAGCTAGCTTCTTCCTCCGAGGTTTCGGATTCTTCCATGTGGGGTATCCCCCTCCTTGGAGGTGACGACAGAGCTGACGTCATACTCTTGAAATTCCTCCGAGCTAGAGACTTTAGGGTCACGGATTCCCTCAACATGCTTCTCAAATGCTTGGCTTGGAGGAAGGAGTTTAAAGCTGATGACATTGTTGATGAGGATTTGGGGTTCAAAGAGCTTGAAGGTGTTATTGCATACATGCAAGGGTATGATAAAGAAGGACACCCTGTTTGTTATAATGCCTATGGGATCTTCAGAGATAAGGAAATGTATGAGAGGATTTTTGGTGATGAAGAGAAGCTGAAGAAGTTTTTGAGGTGGAGGGTTCAAGTTCTTGAAAGAGGGATCAAGCTTCTTCATTTCAAGCCAGGTGGTGTTAATTCTCTGATTCAGGTCACAGATTTGAAAGATATGCCTAAGAGGGAGCTAAGGGCAGCTTCCAATCATATCCTCTCTTTGTTCCAAGACAATTACCCAGAAATGGTGGCCCGTAAGATTTTCATTAATGTGCCCTGGTACTTCAGCATGTTGTATTCAATGTTCAGTCCATTTTTGACCCAAAGAACGAAGAGCAAGTTTGTGATCTCCAAGGAGGGAAATGCTGCAGAGACACTCTATAAATTCATTAGGCCTGAGGATATTCCAGTTCAGTATGGAGGACTGAATCGGCCTAGTGATTTGCAGAATGGTCCCCCTAAACCTGCTTCTGAGTTCACTGTTAAAGGAGGAGAGAAGGTGAACATTCAAATTGAAGGAATTGAGGGTGGAGCAACAATAACATGGGACATAGTGGTGGGAGGGTGGGATTTAGAGTACAGTGCAGAGTTTGTGCCAAGTGCACAAGGGAGCTACAGCATAGCAGTAGAGAAGGCAAGGAAGATTGGAGCCTCAGAGGAAGCTATTCACAACTCTTTCACTGCAAAAGAAGCTGGAAATCTGGTCCTCTCTGTTGATAACTTTGCTTCCAGAAAGAAAAAAGTCGCTGCTTATCGCTACTTTGTCCGCAAAAACAACAGCAGCAGCAGCAACAATAATGTCTGA 1266 0.4479 MSLQNPPFKDLPDASPKPDNNKKSFVTSLMEAATLRTPSFKEDTYFISHLKSSEKKALQDLKNKLASSSEVSDSSMWGIPLLGGDDRADVILLKFLRARDFRVTDSLNMLLKCLAWRKEFKADDIVDEDLGFKELEGVIAYMQGYDKEGHPVCYNAYGIFRDKEMYERIFGDEEKLKKFLRWRVQVLERGIKLLHFKPGGVNSLIQVTDLKDMPKRELRAASNHILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFIRPEDIPVQYGGLNRPSDLQNGPPKPASEFTVKGGEKVNIQIEGIEGGATITWDIVVGGWDLEYSAEFVPSAQGSYSIAVEKARKIGASEEAIHNSFTAKEAGNLVLSVDNFASRKKKVAAYRYFVRKNNSSSSNNNV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi11g0301 421 CDD SEC14 132 296 IPR001251 -
Mibi11g0301 421 Pfam CRAL/TRIO domain 136 295 IPR001251 -
Mibi11g0301 421 SUPERFAMILY CRAL/TRIO N-terminal domain 41 129 IPR036273 -
Mibi11g0301 421 Gene3D - 127 306 IPR036865 -
Mibi11g0301 421 MobiDBLite consensus disorder prediction 1 23 - -
Mibi11g0301 421 SUPERFAMILY CRAL/TRIO domain 133 298 IPR036865 -
Mibi11g0301 421 SMART CRAL_TRIO_N_2 88 113 IPR011074 -
Mibi11g0301 421 Pfam CRAL/TRIO, N-terminal domain 57 111 IPR011074 -
Mibi11g0301 421 PANTHER PATELLIN-1 18 411 IPR044834 GO:0008289
Mibi11g0301 421 ProSiteProfiles GOLD domain profile. 277 411 IPR009038 -
Mibi11g0301 421 SMART sec14_4 134 298 IPR001251 -
Mibi11g0301 421 Gene3D GOLD domain 307 409 - -
Mibi11g0301 421 FunFam SEC14 cytosolic factor family protein 136 311 - -
Mibi11g0301 421 FunFam SEC14 cytosolic factor family protein 46 119 - -
Mibi11g0301 421 Gene3D - 45 119 - -
Mibi11g0301 421 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 312 410 IPR036598 -
Mibi11g0301 421 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 128 301 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi11g0301 Mibi-ChrMibi11 4697396 4699256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi11g0301 92 290 Acyl Lipid Metabolism Gene Families AT1G55840 29.108 1.67e-13 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0301 11 4697396 4699256 Mibi04g2099 04 52545577 52547393 CCT
Mibi11g0301 11 4697396 4699256 Mibi11g0301 11 4697396 4699256 ECH