Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi04g2099 ATGGATTTCTCCTCTTCTCCCATGTCCTTCCAAGCCCTTCCAGAAGCTTCCCCAAAACCTTACAAGAAAAGCTTCGTCACAACTTTAATGGAGGCAGCCACCCTTCGGGGTACTCCTTCCTTCAAAGAAGACACCTACTTCATTTCCAACTTGAAATCTTTCGAGAAGAAGGCTCTTCAAGAGCTCAAACACAAGCTCAAATCCTCTATTTCCTCTGAGTGTTCCTCCATCTGGGGTGTTTCACTTCTTGGAGGTGATGAAAAAGCTGATGTCATTCTCTTGAAATTTCTGAGAGCCAGAGATTTCAGAGTGGAAGATGCTCTCAACATGCTTCTCAAATGCTTGGCTTGGAGAAAGGAGTTTAAAGCTGACGACATCATTGAGGAAGACTTGGGATTCAAAGAGCTTGAAGGGGTTATAGCATATATGCATGGTTATGACAGAGAGGGACACCCTGTGTGTTATAATGCTTATGGGGTTTTCAAAGATAAAGAAATGTATGAAAGAATATTTGCTGGTGAAGAGAAGCTTAAGAAATTCCTGAGATGGAGAGTTCAAGTTATGGAGAGAGGTATTAGGCTTCTTCATTTCAAGCCTGGTGGGGTCAATTCTATTATTCAAGTTATTGACCTTAAAGACATGCCTAAGAGAGAGCTTAGATTGGCTTCTGATCAGATCCTCAGTCTGTTCCAAGACAATTACCCAGAAATGGTGGCACGCAAGATTTTCATCAATGTCCCGTGGTATTTCAGCCTGCTGTATTCAATGTTTAGTCCTTTTCTAACTCAACGAACTAAAAGCAAGTTTGTGATCTCTAAGGAAGGAAATACTGTGGAGACACTATACAAATTCATAAGGCCTGAGGATATTCCAGTTCAGTACGGAGGACTGTGCAGAGCCATTGATTTGCAGAATGGTCCCCCAAAACCTGCCTCTGAGTTCACTGTCAAAGGAGGCGAGAAAGTGAACGTACAAATTGAAGGAATTGAGGCAGGAGCGACAATAACATGGGAGATAGTGGTGGGAGGGTGGGAGTTAGAGTACAGTGCAGAGTTTGTGGGAAGTGCAGAAGGAAGCTACATAATAGAAGTGGAGGAGGCAAGGAAGATGGGAGCATGGGAAGAAGCAATACAGAACTCGTACACAGCAAGAGAAGCAGGCAAGTTGGTACTGTCAGTGGATAACAGTTGCTCTCGCAGGAAAAAAGTTGCTGCTTATCGCTATATTGTTCTCAAATAA 1239 0.431 MDFSSSPMSFQALPEASPKPYKKSFVTTLMEAATLRGTPSFKEDTYFISNLKSFEKKALQELKHKLKSSISSECSSIWGVSLLGGDEKADVILLKFLRARDFRVEDALNMLLKCLAWRKEFKADDIIEEDLGFKELEGVIAYMHGYDREGHPVCYNAYGVFKDKEMYERIFAGEEKLKKFLRWRVQVMERGIRLLHFKPGGVNSIIQVIDLKDMPKRELRLASDQILSLFQDNYPEMVARKIFINVPWYFSLLYSMFSPFLTQRTKSKFVISKEGNTVETLYKFIRPEDIPVQYGGLCRAIDLQNGPPKPASEFTVKGGEKVNVQIEGIEAGATITWEIVVGGWELEYSAEFVGSAEGSYIIEVEEARKMGAWEEAIQNSYTAREAGKLVLSVDNSCSRRKKVAAYRYIVLK 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi04g2099 412 FunFam SEC14 cytosolic factor family protein 47 120 - -
Mibi04g2099 412 SMART CRAL_TRIO_N_2 89 114 IPR011074 -
Mibi04g2099 412 SUPERFAMILY CRAL/TRIO domain 134 301 IPR036865 -
Mibi04g2099 412 SUPERFAMILY CRAL/TRIO N-terminal domain 46 130 IPR036273 -
Mibi04g2099 412 Gene3D - 48 120 - -
Mibi04g2099 412 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 313 411 IPR036598 -
Mibi04g2099 412 Gene3D - 125 307 IPR036865 -
Mibi04g2099 412 SMART sec14_4 135 299 IPR001251 -
Mibi04g2099 412 Pfam CRAL/TRIO, N-terminal domain 58 112 IPR011074 -
Mibi04g2099 412 ProSiteProfiles GOLD domain profile. 296 412 IPR009038 -
Mibi04g2099 412 CDD SEC14 133 297 IPR001251 -
Mibi04g2099 412 PANTHER PATELLIN-1 24 410 IPR044834 GO:0008289
Mibi04g2099 412 Pfam CRAL/TRIO domain 137 296 IPR001251 -
Mibi04g2099 412 Gene3D GOLD domain 308 409 - -
Mibi04g2099 412 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 128 302 IPR001251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi04g2099 Mibi-ChrMibi04 52545577 52547393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi04g2099 93 291 Acyl Lipid Metabolism Gene Families AT1G55840 26.389 7.75e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi11g0301 11 4697396 4699256 Mibi04g2099 04 52545577 52547393 CCT