Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mibi09g0307 | ATGGATCCAAACCCTAGAAGCTTCCCTCTTCTCTCCTCCTTCCTCTCCCGCCTCCCTTCTTTCTCTCCCAATTCCAATTCCAATTCCGACCTCCACGACATCGAACAGCCCCAAATTCCGCCGTCTGATCCGTCGTCTTCCGGTATAAAGAATCCCCAAATTCCCCAAATCACTGACCCTAAACTCTTATCTTCAATCACTCACACCATCTACGACATCTCTCAAACCAGATCCATGCTCACAGTCCTCGGTCCACGACCCGATCACGAATCCGTAGACAATGCGAAGGCGAAACTCGCCGATTTGGAAGCACATTTGTCCAGAAAGCTTGAGGAGATAGTGATTTCGTCTAAGCCTCCTCATATTGACAGCCTACAATGGCGGATCCAGCAGTCGGAGAGAGAGAATGAGTGTAGGAAATTGGTGGAGGATGAGAAGAGTGTATATAAGGCGGTGATTCAATTGGATGAGATGCATGATGCGTATGAGAAGTTGTTGAAGGATGCTGAGAGGAGATTGGAGGCCATTTATTATTATTCTGGTGATGGAGGTGGGGATATGGAGGAGGGAGAGAGGTTGGAAGCAGAGGAGGTGAATGAAGAAGTGGTTGGGATTCTGGAAAAGGCGTACGGACATGGGATTCAGAGGATTCTTCTCTCCAAACGTGGCCTGAAGTTGCTTCCTGAGGCTTTTTGCAGAATCTCTGCCTTGTTGGCTCTTGATGTTTCCAACAATCAGCTCACGGGGATTCCTGATGCGGTGGCGGGATTGCAGAACCTGGAGGAGCTGAATGTGTCTTCAAATCATTTGGAGTCACTTCCTGATTCAATTGGTTTGCTCCAAAAGTTGAAGATCCTCAATGTCTCTGGAAACAAACTCACCTCGCTCCCTGACTCCATCTCCCATTGCATGTCATTGGTGGAGTTGGATGCTAGCTACAACAGTCTCAAGTATTTGCCCACAAATATTGGATATGAATTACAGAACTTACGGAAGCTGTTGATTCATCTGAACAAACTTCGGTCACTTCCTTCATCTGTGTGTGAAATGAGATCCCTGCGCTATCTAGATGCACATTTCAATGAACTGAATGGACTTCCAAGCTCATTTGGAAGATTAACCAACCTTGAGGTCCTTGACCTGAGCAGTAATTTCGCAGACCTTCGAGAACTTCCGGTGACATTTTGTGATCTGATCAATCTCAAGGAGTTAAATCTTAGCAACAATCAGATCAGTGCACTTCCAGATGCATTTGGTCGCCTGGAGAATTTGAAGAAACTTAACTTGGAACAGAACCCTCTTGAAATGCCACCAAAAGAGGTAGTGAGGCAAGGAGTTTTGGGAGTGAGGACTTATATGACGGCAAGGTTGGTGAACATATTGAATGAGGAAGAAAGAGAAAGGGTGGCCATGCAAGAACAATCCCCAAAGGCTTGGCTAACAAGAAGCACCTCATGGTTAAAGAGTGTATCTGGGAATTTCGTAGAATATGTCAAATCTCCCAAGAGTACTTCAAGAGGGTCTTATCTTGATGAGCAGCTATAA | 1545 | 0.4583 | MDPNPRSFPLLSSFLSRLPSFSPNSNSNSDLHDIEQPQIPPSDPSSSGIKNPQIPQITDPKLLSSITHTIYDISQTRSMLTVLGPRPDHESVDNAKAKLADLEAHLSRKLEEIVISSKPPHIDSLQWRIQQSERENECRKLVEDEKSVYKAVIQLDEMHDAYEKLLKDAERRLEAIYYYSGDGGGDMEEGERLEAEEVNEEVVGILEKAYGHGIQRILLSKRGLKLLPEAFCRISALLALDVSNNQLTGIPDAVAGLQNLEELNVSSNHLESLPDSIGLLQKLKILNVSGNKLTSLPDSISHCMSLVELDASYNSLKYLPTNIGYELQNLRKLLIHLNKLRSLPSSVCEMRSLRYLDAHFNELNGLPSSFGRLTNLEVLDLSSNFADLRELPVTFCDLINLKELNLSNNQISALPDAFGRLENLKKLNLEQNPLEMPPKEVVRQGVLGVRTYMTARLVNILNEEERERVAMQEQSPKAWLTRSTSWLKSVSGNFVEYVKSPKSTSRGSYLDEQL | 514 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mibi09g0307 | 514 | Gene3D | Ribonuclease Inhibitor | 102 | 327 | IPR032675 | - | |
| Mibi09g0307 | 514 | SUPERFAMILY | L domain-like | 212 | 438 | - | - | |
| Mibi09g0307 | 514 | FunFam | Plant intracellular Ras-group-related LRR protein 9 | 134 | 318 | - | - | |
| Mibi09g0307 | 514 | MobiDBLite | consensus disorder prediction | 17 | 58 | - | - | |
| Mibi09g0307 | 514 | PANTHER | - | 116 | 335 | - | - | |
| Mibi09g0307 | 514 | ProSiteProfiles | Leucine-rich repeat profile. | 259 | 280 | IPR001611 | GO:0005515 | |
| Mibi09g0307 | 514 | SMART | LRR_bac_2 | 327 | 346 | - | - | |
| Mibi09g0307 | 514 | SMART | LRR_bac_2 | 373 | 394 | - | - | |
| Mibi09g0307 | 514 | SMART | LRR_bac_2 | 350 | 369 | - | - | |
| Mibi09g0307 | 514 | SMART | LRR_bac_2 | 303 | 322 | - | - | |
| Mibi09g0307 | 514 | SMART | LRR_bac_2 | 398 | 417 | - | - | |
| Mibi09g0307 | 514 | SMART | LRR_bac_2 | 257 | 276 | - | - | |
| Mibi09g0307 | 514 | SMART | LRR_bac_2 | 234 | 253 | - | - | |
| Mibi09g0307 | 514 | SMART | LRR_bac_2 | 280 | 299 | - | - | |
| Mibi09g0307 | 514 | PRINTS | Leucine-rich repeat signature | 398 | 411 | - | - | |
| Mibi09g0307 | 514 | PRINTS | Leucine-rich repeat signature | 237 | 250 | - | - | |
| Mibi09g0307 | 514 | Coils | Coil | 92 | 112 | - | - | |
| Mibi09g0307 | 514 | ProSiteProfiles | Leucine-rich repeat profile. | 282 | 303 | IPR001611 | GO:0005515 | |
| Mibi09g0307 | 514 | Pfam | Leucine rich repeat | 259 | 316 | IPR001611 | GO:0005515 | |
| Mibi09g0307 | 514 | Pfam | Leucine rich repeat | 394 | 434 | IPR001611 | GO:0005515 | |
| Mibi09g0307 | 514 | Pfam | Leucine rich repeat | 329 | 384 | IPR001611 | GO:0005515 | |
| Mibi09g0307 | 514 | SMART | LRR_typ_2 | 398 | 420 | IPR003591 | - | |
| Mibi09g0307 | 514 | SMART | LRR_typ_2 | 373 | 397 | IPR003591 | - | |
| Mibi09g0307 | 514 | SMART | LRR_typ_2 | 421 | 444 | IPR003591 | - | |
| Mibi09g0307 | 514 | SMART | LRR_typ_2 | 327 | 348 | IPR003591 | - | |
| Mibi09g0307 | 514 | SMART | LRR_typ_2 | 350 | 372 | IPR003591 | - | |
| Mibi09g0307 | 514 | SMART | LRR_typ_2 | 234 | 256 | IPR003591 | - | |
| Mibi09g0307 | 514 | SMART | LRR_typ_2 | 257 | 279 | IPR003591 | - | |
| Mibi09g0307 | 514 | SMART | LRR_typ_2 | 280 | 303 | IPR003591 | - | |
| Mibi09g0307 | 514 | SMART | LRR_typ_2 | 305 | 326 | IPR003591 | - | |
| Mibi09g0307 | 514 | Gene3D | Ribonuclease Inhibitor | 328 | 453 | IPR032675 | - | |
| Mibi09g0307 | 514 | Coils | Coil | 152 | 172 | - | - | |
| Mibi09g0307 | 514 | FunFam | Plant intracellular Ras-group-related LRR protein 2 | 322 | 494 | - | - | |
| Mibi09g0307 | 514 | ProSiteProfiles | Leucine-rich repeat profile. | 400 | 421 | IPR001611 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mibi09g0307 | Mibi-ChrMibi09 | 3765371 | 3767999 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mibi09g0307 | 227 | 441 | Receptor kinase-like Gene Family | AT5G46330 | 31.839 | 4.37e-17 | 82.8 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Mibi09g0307 | 09 | 3765371 | 3767999 | Mibi13g0560 | 13 | 7361897 | 7364520 | CCT | |
| Mibi09g0307 | 09 | 3765371 | 3767999 | Mibi09g0307 | 09 | 3765371 | 3767999 | ECH |