Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi09g0286 ATGCTCTTTGTTTGTAAGAGAGTGAGCAGAGGAAGGAAAGGCATGAAGGCGACACTAAGATACTTAGCAGGTATGGCTGGACCAAGTGGTTATGGCTCAAATTCAACAGCGGAGCAAGTCACTGAACATTGCTCTAATTGCTTTCTCTCTTCTCATCTCACTGCTCTTATCACAGGTGGAACTTCTGGGATTGGAGCAGAAACAGCTAGAGTGTTGGCAAAGAGAGGAGTGAGAGTAGTGATAGGAGCAAGGGACATGAAGAAAGGGAGAGAATTGAAACAGAATATACAGAAACAAACTCCAAACGCTCAAGTTATTGTGTTGGAAATCGATCTCAGTTCTTTTGCTTCTATACAGAGATTTTGTTCTGAGTTTTTGGCATTACATCTTCCCCTCAACATCCTCATAAACAATGCTGGAATATTCTCTCAGAGCTTGGAATTCTCCGAAGAGAAAATTGAGATGACCTTTGCCACCAATTACTTGGGACATTTTTTGTTGACGGAAATGCTGATAGAGAAAATGATAGAAACAGCAGAGAAGAGTGGGATTGAAGGAAGGATCATAAATGTGTCTTCTGTGATCCATAGTTGGGTCAAGAGAGATGCTTTTCATTTCCACCACTTGCTCAATGGAACAAGATATAATGGCACACGTGCATATGCTCAATCAAAATTGGCCAATATTTTGCATGCCAAGGAATTGGCCAGACAGCTTAAGGCAAGGAATGCAAAAGTAACAGTGAATGCAGTTCATCCGGGGATTGTAAAGACAGGAATTATCAGAGCTCATAAAGGTTTAATAACAGATTCCCTGTTCTTCATCGCATCCAAATTGCTCAAATCAACATCTCAGGGAGCAGCAACAACGTGTTACGTAGCAACGAGTTCACAAACAGAAGGGTTGAGTGGGAAATACTTTGCAGATTGTAATGAGAGTAAGTGCTCAAGTGTTGCAAATGACGAATTTGAAGCTCAGAAGCTATGGAACAACACTAGAGCTTTACTTCATAAACGACTACGTCAAGCCTCCTCTTAA 1038 0.4123 MLFVCKRVSRGRKGMKATLRYLAGMAGPSGYGSNSTAEQVTEHCSNCFLSSHLTALITGGTSGIGAETARVLAKRGVRVVIGARDMKKGRELKQNIQKQTPNAQVIVLEIDLSSFASIQRFCSEFLALHLPLNILINNAGIFSQSLEFSEEKIEMTFATNYLGHFLLTEMLIEKMIETAEKSGIEGRIINVSSVIHSWVKRDAFHFHHLLNGTRYNGTRAYAQSKLANILHAKELARQLKARNAKVTVNAVHPGIVKTGIIRAHKGLITDSLFFIASKLLKSTSQGAATTCYVATSSQTEGLSGKYFADCNESKCSSVANDEFEAQKLWNNTRALLHKRLRQASS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi09g0286 345 CDD retinol-DH_like_SDR_c_like 54 329 - -
Mibi09g0286 345 Pfam short chain dehydrogenase 54 195 IPR002347 -
Mibi09g0286 345 Gene3D - 45 341 - -
Mibi09g0286 345 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 54 313 IPR036291 -
Mibi09g0286 345 PANTHER RETINOL DEHYDROGENASE 28 335 - -
Mibi09g0286 345 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 186 194 IPR002347 -
Mibi09g0286 345 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 141 IPR002347 -
Mibi09g0286 345 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 221 240 IPR002347 -
Mibi09g0286 345 PRINTS Glucose/ribitol dehydrogenase family signature 54 71 IPR002347 -
Mibi09g0286 345 PRINTS Glucose/ribitol dehydrogenase family signature 244 261 IPR002347 -
Mibi09g0286 345 PRINTS Glucose/ribitol dehydrogenase family signature 180 196 IPR002347 -
Mibi09g0286 345 PRINTS Glucose/ribitol dehydrogenase family signature 130 141 IPR002347 -
Mibi09g0286 345 PRINTS Glucose/ribitol dehydrogenase family signature 221 240 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi09g0286 Mibi-ChrMibi09 3472070 3475267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi09g0286 33 260 Acyl Lipid Metabolism Gene Families AT1G63380 31.197 5.96e-16 75.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi09g0286 09 3472070 3475267 Mibi13g0573 13 7510517 7513288 CCT
Mibi09g0286 09 3472070 3475267 Mibi09g0286 09 3472070 3475267 ECH