Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2437 ATGATATCAAAGGAGAAGTTGAGGACTGAGGACTTGAACTCGTGCTTTGAGAAGCTGATGATGGTTGCTGGAGGCGAGAAAGGTGGTAAAGGATTGAAAATGGAGGATGGGGTGGATTCAGAATGGAAAGATATTCCTGTGGAACTTTTGATGAAAATACTGAGCCTTTTGGACGATCAGACGGTGATCGCAGCTTCTGGTGTATGTCGAGGGTGGAGAAAAGCTATTTGCTTTGGCCTTACCCGTTTATCACTCTCATGGTGCAGCAAGAACATGAATAATCTGGTCCTATTTCTTGCTCCTAAATTCACAAAATTGCAAACTCTAATCCTTCGTCAAGAGAAGCCTCAGCTGGAGGATACTGCTGTTGAGACCATTGCAAATTTCTGTCATGACCTGCAGATCCTGGACCTGAGCAAAAGTTTCAAGCTGACCGATCGTTCATTGTATGCCTTAGCCCATGGTTGCCCTGATCTCACAAAACTGAACATCAGTGGGTGTTCAGCATTTAGTGACACTGCTCTGGCATACCTGGCCAGTTTCTGCAGAAAATTAAGAGTCTTAAATCTCTGTGGATGCGTGAAAGCTGCATCTGACACAGCATTACAGGCAATTGGACGCTATTGCAATGAGTTGCAATCTTTGAACATAGGATGGTGCGAAGATGTAGGTGATGTTGGAGTAATGAGTCTAGCCCATGGGTGCCCTGATCTTAGGACACTAGACCTGTGTGGTTGTATCTGTATAACAGATGAAAGTGTGGTTGCACTGGCAAACAGATGTCCTTATTTGAGGTCTCTGGGGCTGTACTATTGCCAAAACATAACAGACAAGTCCATGCATTCTTTGGCAGAGAGCAAAGTGAAAGGAGGGAAGGAGGAAGAGGGGCTGAGGACTCTGAACATAAGCCAATGCACAGCACTTACGCCGTCGGCGGTTCAGGCGGTGTGTGACTCCTTCCCAGCGTTACACACTTGCTCCGGCAGGCATTCTCTCATTATGAGTGGATGTCTTAGCCTGACTTCTGTGCACTGTGCATGTGCTGGCCATCCACTACACTAA 1062 0.4642 MISKEKLRTEDLNSCFEKLMMVAGGEKGGKGLKMEDGVDSEWKDIPVELLMKILSLLDDQTVIAASGVCRGWRKAICFGLTRLSLSWCSKNMNNLVLFLAPKFTKLQTLILRQEKPQLEDTAVETIANFCHDLQILDLSKSFKLTDRSLYALAHGCPDLTKLNISGCSAFSDTALAYLASFCRKLRVLNLCGCVKAASDTALQAIGRYCNELQSLNIGWCEDVGDVGVMSLAHGCPDLRTLDLCGCICITDESVVALANRCPYLRSLGLYYCQNITDKSMHSLAESKVKGGKEEEGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLIMSGCLSLTSVHCACAGHPLH 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2437 353 SUPERFAMILY RNI-like 76 344 - -
Mibi08g2437 353 SUPERFAMILY F-box domain 42 86 IPR036047 GO:0005515
Mibi08g2437 353 Pfam Leucine Rich repeat 209 232 IPR001611 GO:0005515
Mibi08g2437 353 Pfam Leucine Rich repeat 235 258 IPR001611 GO:0005515
Mibi08g2437 353 ProSiteProfiles F-box domain profile. 39 76 IPR001810 GO:0005515
Mibi08g2437 353 Gene3D Ribonuclease Inhibitor 79 306 IPR032675 -
Mibi08g2437 353 Gene3D - 37 78 - -
Mibi08g2437 353 PANTHER UNCHARACTERIZED 223 342 - -
Mibi08g2437 353 FunFam F-box protein SKP2B 77 295 - -
Mibi08g2437 353 Pfam F-box domain 42 77 IPR001810 GO:0005515
Mibi08g2437 353 SMART LRR_CC_2 77 102 IPR006553 -
Mibi08g2437 353 SMART LRR_CC_2 261 286 IPR006553 -
Mibi08g2437 353 SMART LRR_CC_2 130 155 IPR006553 -
Mibi08g2437 353 SMART LRR_CC_2 182 208 IPR006553 -
Mibi08g2437 353 SMART LRR_CC_2 235 260 IPR006553 -
Mibi08g2437 353 SMART LRR_CC_2 103 129 IPR006553 -
Mibi08g2437 353 SMART LRR_CC_2 156 181 IPR006553 -
Mibi08g2437 353 SMART LRR_CC_2 294 319 IPR006553 -
Mibi08g2437 353 SMART LRR_CC_2 209 234 IPR006553 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2437 Mibi-ChrMibi08 42153036 42154855 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2437 08 42153036 42154855 Mibi05g0263 05 2624421 2627879 CCT
Mibi08g2437 08 42153036 42154855 Mibi08g2437 08 42153036 42154855 ECH