Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0263 ATGCATTATCGTATACGCCTTCAGGCGGGACCCACGAGACCGCTGCATCACACAACACGTGGCGTCGCACGCGTCGTTCAACCATCCATCCCCCCTCTCCGCTCGCTGCTTTCCCATACGTTACACATATTACCTGGTCGCTTTAGCCTTGCACGCAATCCAACTGTTCTTGATATTATCTGCATTCCTTGTTCCTCTTCTCCAGCTTTTACCGGTAATGATCTCTCCTTTGATATCTCTTCCTTTCTCTCTTACTATCTGGCGGTTGAGCTTAAAAGTGAAATGGTTGGCAAGGAGAAGTTGAGGACGGAGGACTTGAACTTATGCTTTGAGAAACTTATGATGGTTGCAGGCGCTGGTAACAGTACCAAAGGAGAGAAGATGGAAGGCGTGGTGATCACCGAATGGAAGGATATTCCAGTGGAGCTTCTGATGCAGATTCTGTCCCTTACTGATAATCAGACTGTGATCGCAGCTTCTGGAGTCTGCCGTGGATGGAGAGATGCTATCTGCTTTGCCCTTTCCCGTTTGTCACTCTCATGGTGCAGCAAGAACATGAATAACTTGGTCCTATCGCTTATGCCTAAATTTACAAAAGTACAAATTTTAGTCCTCCGTCAAGACAAACCCCAACTAGAGGATAATGCAGTCGAGACTATCTCAAATTTCTGTCACGACCTGCAGATGCTGGATCTTAGCAAGAGTTTCAGGCTTACCGATCGGTCTCTGTATGCCTTAGCCCATGGATGTCCTGGTCTTACAAATCTGAACATCAGTGGGTGCTCGGCATTTAGCGATGTTGCTCTGGCATGCCTAGCCAGTTCCTGCAGAAAATTGAAGTGTCTAAATCTTTGTGGATGTGTTAGAGCAGCATCAGACACAGCATTACAGGCTATAGGACATTATTGCAACCAATTACAGTCTCTGAACCTTGGATGGTGTGAAAATGTTGGCGATGATGGAGTGACAAGTTTAGCAGTTGGTTGCCCTGATCTTAGAACACTTGACTTGTGTGGTTGTGTCCTTATAACAGATGAGAGTGTGATTGCTTTGGCAAACGGTTGTCCCCATCTGAGGTCCCTTGGTCTGTACTACTGTCAAAACATCACAGACAGAGCAATGTATTCATTGGCCCATAGCAAAATGAATAACAGGATGTGGAGATCTGTGAAAGGAATTAATGAAGAGGATGGCCTCAGAACTCTCAACATCAGCCAATGCACAGCACTCACACCCTCTGCTGTTCAAGCCGTGTGTGATTCCTTCCCGGCGCTTCACACCTGCTCCGGCAGGCACTCACTCATCACGAGTGGCTGTTTGAACCTCACTTCTGTGCATTGTGCCTGTGCTGTGCATTCCCATCGAGCAATAGCCTCTCTTCCATATCAAGCTCACTGA 1398 0.4707 MHYRIRLQAGPTRPLHHTTRGVARVVQPSIPPLRSLLSHTLHILPGRFSLARNPTVLDIICIPCSSSPAFTGNDLSFDISSFLSYYLAVELKSEMVGKEKLRTEDLNLCFEKLMMVAGAGNSTKGEKMEGVVITEWKDIPVELLMQILSLTDNQTVIAASGVCRGWRDAICFALSRLSLSWCSKNMNNLVLSLMPKFTKVQILVLRQDKPQLEDNAVETISNFCHDLQMLDLSKSFRLTDRSLYALAHGCPGLTNLNISGCSAFSDVALACLASSCRKLKCLNLCGCVRAASDTALQAIGHYCNQLQSLNLGWCENVGDDGVTSLAVGCPDLRTLDLCGCVLITDESVIALANGCPHLRSLGLYYCQNITDRAMYSLAHSKMNNRMWRSVKGINEEDGLRTLNISQCTALTPSAVQAVCDSFPALHTCSGRHSLITSGCLNLTSVHCACAVHSHRAIASLPYQAH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0263 465 Pfam F-box-like 137 171 IPR001810 GO:0005515
Mibi05g0263 465 FunFam F-box protein SKP2B 171 389 - -
Mibi05g0263 465 SUPERFAMILY F-box domain 133 171 IPR036047 GO:0005515
Mibi05g0263 465 Pfam Leucine Rich repeat 329 352 IPR001611 GO:0005515
Mibi05g0263 465 Pfam Leucine Rich repeat 303 326 IPR001611 GO:0005515
Mibi05g0263 465 Pfam Leucine Rich repeat 355 378 IPR001611 GO:0005515
Mibi05g0263 465 PANTHER UNCHARACTERIZED 144 429 - -
Mibi05g0263 465 SUPERFAMILY RNI-like 170 425 - -
Mibi05g0263 465 Gene3D - 135 170 - -
Mibi05g0263 465 SMART LRR_CC_2 171 196 IPR006553 -
Mibi05g0263 465 SMART LRR_CC_2 396 421 IPR006553 -
Mibi05g0263 465 SMART LRR_CC_2 303 328 IPR006553 -
Mibi05g0263 465 SMART LRR_CC_2 224 249 IPR006553 -
Mibi05g0263 465 SMART LRR_CC_2 355 380 IPR006553 -
Mibi05g0263 465 SMART LRR_CC_2 250 275 IPR006553 -
Mibi05g0263 465 SMART LRR_CC_2 276 302 IPR006553 -
Mibi05g0263 465 SMART LRR_CC_2 329 354 IPR006553 -
Mibi05g0263 465 Gene3D Ribonuclease Inhibitor 171 398 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0263 Mibi-ChrMibi05 2624421 2627879 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2437 08 42153036 42154855 Mibi05g0263 05 2624421 2627879 CCT
Mibi05g0263 05 2624421 2627879 Mibi05g0263 05 2624421 2627879 ECH