Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2294 ATGGCAGCGAAGGTCAAAACCATGGTGGAGAATGATGTGGGCTGTGGTTTTGTTGGGAGGCTATCCCTTCTCAGAACCCACCTCCTCAAAAAATCATCCGTCCATTCGATATCCTTGAAACCTGCCGACAATTTACAGATCAAGGAGAACAAAAAGGATACCAAAAAGCCTACGAATCAAGAATCAAAGGGCACGCGAAATATCCACACAGAGTCACAAAAACCAGATTTGGATCAGAAGACACCCAGAAAGAGCACCTCTAGTCAGAGCCGGAGACCATCAGATGCTGCCAGAAGCTCAACATCATCATCATCTGGTAACTCAACTAACACAAAGAACGATGAGAACAAGTCACTGGAGCTTCCAAGGATAAGCACTAGTCACCAGAGAGACAATGAGAATAAAGCCACACTCAACTTGAAAATCACTGGGAATTTGCTTGCAAATAACAGCCCCAGAAATAGTGTGACAAAGAAAGTGGAATCCGTTCCCAAGAGTAAAGAGTTGAATTCTGTGACTATTTCTTACAATAATGCGGGGATGGGGAACATCATGAGGAAGAACAGCGATGAGCTTGCACAACTTAGGAGACAGAGGGTCAGAGTAGACCCTGAGGTGTTGAAAACTGAGGGAAATGAAGCATACAAACAGGGGAAATATGAAGAAGCATTGAGTCTTTATAACCAAGCCATTCATATTGATTCAAATAAGGCAACTTATCATTGCAATAAGAGTGCAGCTTTGATGGGCTTAGGCCGCCTTCCAGAAGCATTGGTTGAATGTGAAGAAGCTATTCGCCTTGAACCTTCTTATACAAGAGCTCACCACCGTTTGGCTGCCATATATATCAGATTGGGAGAAGCAGAGAAGGCGATTAACTGCAATAATTCAACTCCATATGCGGATTCTGTAATCACATTCCAAGCTCAGGCTCTTCAAAACCATCTTAACAGATGCCTTGAAGCTCGGAAAGTGAATGAGTGGAACGTTATACTGAAGGAAACACAATCTGCAATATCATTATATGCTGATTCAGCTCCTCAGGTCTATGCTCTACAAATAGAAGCTTTACTCAAGCTCCTGAAACATGAAGAGGCTTCTTCTACCTACGAAAAAATGCCCAAATTTGAACTTGATTGGTGTATTAAGATTTTTGGCTTATCACTTACTGCATACTTGTTGGCAGTAGGTGCTCAAGTTCACTTGGCAGCCGGCAGGTTTGACGAAGCTGTGATATCTGCTCGGCAAGCAGCTGAACTTGATCCAACCAACAGAGAGGTGAATTCAGTGGTAAGAAGGACGAGAGCAGTAAGATCAGCGAGGATGAGTGGAAATTTACTGTTCAAAGCTTCCAAGTTCATGGAAGCGTGTGGGGTTTATAATGAAGGGCTAGAACATGATCCATTCAACTCAGTGCTGCTATGCAATAGAGCAGCATGCCGTTCTAAGCTTGGTCAATTTGAGAAAGCAATTGAAGATTGTAACGCTGCCCTTGCAATCCAACCTTATTACAGCAAGGCAAGGTTAAGGAGGGCAGACTGCAATGCTAAGTTGGAAAGATGGGGAGCTGCAATTCAAGACTATGAAATGCTGATGAGAGAAACGCCAGGGGATGAGGAAGTGGCAAGGGCTTTGTTTGATGCCCAACTTCAACTCAAGATGCTGAAAGGAGAAGATATTAAAGACTTGAAATTTGGTTCCAATTTGGTTTCCATATCCAGCAATGATCGCTTTAGACATTATGTGACCTTGCCTGGCATGTCCGTGGTTCTGTTTTGCAACAAGGCAACCCACAAACAAGTGTTATTGGTATTGGAGCAAACATGCAAGAGATTCCCATCTGTTAATTTCCTCAAGGTGGAGATTGAAGATCATCCCTACTTGGCAAAATCAGAAGGCGTGAGCTCTGTGCCAGCCTTCAGAATATACAAGAACGGATCAAGGGTCAAAGAGATTCCAGGCAACAAACACGAGTTGTTAGAAAGATCAGTTAAACTGTATACTAGCTGA 2010 0.4318 MAAKVKTMVENDVGCGFVGRLSLLRTHLLKKSSVHSISLKPADNLQIKENKKDTKKPTNQESKGTRNIHTESQKPDLDQKTPRKSTSSQSRRPSDAARSSTSSSSGNSTNTKNDENKSLELPRISTSHQRDNENKATLNLKITGNLLANNSPRNSVTKKVESVPKSKELNSVTISYNNAGMGNIMRKNSDELAQLRRQRVRVDPEVLKTEGNEAYKQGKYEEALSLYNQAIHIDSNKATYHCNKSAALMGLGRLPEALVECEEAIRLEPSYTRAHHRLAAIYIRLGEAEKAINCNNSTPYADSVITFQAQALQNHLNRCLEARKVNEWNVILKETQSAISLYADSAPQVYALQIEALLKLLKHEEASSTYEKMPKFELDWCIKIFGLSLTAYLLAVGAQVHLAAGRFDEAVISARQAAELDPTNREVNSVVRRTRAVRSARMSGNLLFKASKFMEACGVYNEGLEHDPFNSVLLCNRAACRSKLGQFEKAIEDCNAALAIQPYYSKARLRRADCNAKLERWGAAIQDYEMLMRETPGDEEVARALFDAQLQLKMLKGEDIKDLKFGSNLVSISSNDRFRHYVTLPGMSVVLFCNKATHKQVLLVLEQTCKRFPSVNFLKVEIEDHPYLAKSEGVSSVPAFRIYKNGSRVKEIPGNKHELLERSVKLYTS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2294 669 SUPERFAMILY TPR-like 442 553 IPR011990 GO:0005515
Mibi08g2294 669 CDD TRX_family 578 661 - -
Mibi08g2294 669 Pfam TPR repeat 211 252 - -
Mibi08g2294 669 SUPERFAMILY TPR-like 204 426 IPR011990 GO:0005515
Mibi08g2294 669 MobiDBLite consensus disorder prediction 45 135 - -
Mibi08g2294 669 Pfam Tetratricopeptide repeat 398 424 IPR019734 GO:0005515
Mibi08g2294 669 MobiDBLite consensus disorder prediction 45 81 - -
Mibi08g2294 669 MobiDBLite consensus disorder prediction 116 130 - -
Mibi08g2294 669 Pfam Tetratricopeptide repeat 473 503 IPR001440 GO:0005515
Mibi08g2294 669 Pfam Thioredoxin 604 660 IPR013766 -
Mibi08g2294 669 ProSiteProfiles TPR repeat profile. 204 237 IPR019734 GO:0005515
Mibi08g2294 669 Gene3D Tetratricopeptide repeat domain 202 557 IPR011990 GO:0005515
Mibi08g2294 669 SUPERFAMILY Thioredoxin-like 555 659 IPR036249 -
Mibi08g2294 669 SMART tpr_5 391 424 IPR019734 GO:0005515
Mibi08g2294 669 SMART tpr_5 505 538 IPR019734 GO:0005515
Mibi08g2294 669 SMART tpr_5 204 237 IPR019734 GO:0005515
Mibi08g2294 669 SMART tpr_5 238 271 IPR019734 GO:0005515
Mibi08g2294 669 SMART tpr_5 471 504 IPR019734 GO:0005515
Mibi08g2294 669 SMART tpr_5 437 470 IPR019734 GO:0005515
Mibi08g2294 669 ProSiteProfiles TPR repeat profile. 391 424 IPR019734 GO:0005515
Mibi08g2294 669 Gene3D Glutaredoxin 567 668 - -
Mibi08g2294 669 MobiDBLite consensus disorder prediction 82 115 - -
Mibi08g2294 669 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 48 665 IPR044534 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2294 Mibi-ChrMibi08 40669369 40671854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2294 216 292 Glycosyltransferase AT3G04240 35.065 1.47e-06 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2294 08 40669369 40671854 Mibi05g0420 05 4063355 4066140 CCT