Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0420 ATGGCAGGAAGGGCCAAGAACAAGATGGAGAATGAAATAGGTTGTGGTCTTATATGGAGGATTTTCCATCTCACAAGCTACAAGATGCGAAAATCATCTGTTCATTCACTACCCACGAAGGCTAGCAATAATGTCCAGAACGATCATAGCAAAACCGAATCCAAGAAGCAATCAAATCTCGAGTCAAAGCCTACTTCAACTGAGTCTCACAAACCACCCAGAAAGAGCCATTCGGATCATCGGAAGAATAGAAATCAGAGACCATCAGACACTGCAAGAATCTCAGCATCCTCCTCCTCCAACAATTCATCCCAAATTAAGATTCAACAATACCACAAGTCGAACAATGATATCAGAACACAGAGACAGCCTACTGAAAACTCTCTGGAGCTTGCCAAGTTAAGCACTCATTACAAGCGAGAAAACAAGAATAAATCCTCCATCAAACTTACTGGTAATTTGGTTGTAAATAATAGCCCAAGAAGTACAACTAGGAGTCATGAAAATGTTCCCAAGAATAAAGAGGTGACGAACTCAGCGCCCAATAAGTCTTACACTAACGCTAGTGTAAACGTGATGGGGAATATTATGAGAAAGAGCACTGATAAACTTGCACAATTACGGAATCCTCCAAACAGAGTAGACCCTGAAGTGTTGAAGACAATGGGAAATGAAACATATAAGGAAGGAAGATTTGAAGAGGCTTTGTCTTTGTATGAGCAAGCGATTGCTATTGATTCAAGTAAGGCAACGTTTCATTGCAATAAGAGTGCAGCTTTGATAGGATTAGGCCGTCTTCAGGAAGCAATTATTGAGTGCCAGCAAGCTATTAGGTTGAAGCCTTCTTATAGCAGACCTTATAACCGTTTGGCAACCATCTATATCAGATTGGGAGAAGCAGAGAAGGCACTAAGTTACAATGTCGCAACCGCACATTTTGATTCTGCAATCGCCTTGCAAGCTCAGTCTATTCGCAACCACCTTCAAAAATGCATTGAAGCAAGGAAAATAAATGCTTGGGATGCTATACTGAAGGAAACGCAGTCTGCTATATCATTGGGTGCTGATGCAAGTCCTCAGGTTTATGCGTTGCAAACAGAAGCCTTACTTAGGCTTTTTAGACATCAAGAGGCATGTGCCACCTATGAGAAAATGCCAAAATTTGCTATTAATTGGTGCACCAAGTTATTTGGTCTGGCTCGTAGTGCTTATATGTTTATGATAGGCGCGCAGGCTTACTTGGCAGCTGGCAGGTTCAAGGAAGCAGTGACAGCAGCTGAGCAAGCAGCTAATTTTGATCCAAGCAACAAAGAGGTGAGTGTAGTGGTAAAGAGGGCCAAAGCAATGTCATCAGCCAGAACGAGTGGAAACTTACTGTTCAGGGCATCCAAATATTCTGAAGCATATGCTGTATATAACGAAGGACTAGAGCAGGATCCATACAACTCACTTCTTCTATGCAACAGAGCAGCATGTCGTTCAAAGCTGGGCCAATTTGAGAAAGCCATTGAAGATTGTAATGCAGCCCTTGCAGTTCGGCCTAGTTATAGCAAGGCACGGTTAAGGAGGGCAGATTGTAATGCCAAGTTGGAAAGATGGGAAGCGGCAATTCAAGACTATGAAATGCTATTGAGGGAGAAGCCAGGGGATGAGGAGGTGGGTAAGGCTCTGTTCGAGGCCCAGACTCAACTCAAGATTCTGCGTGGAGAAGATGTTAAGGACTTCAAATTTGGGTGTAAATTGATTTATGTATCGTGCAATGATAGGTTTCAACATTATGTAAGCTCACCTGGTATGTCCGTGGTGCTATTTTGCAACAAGGCAACTCACAAGCAAGTATTGCTAGTGTTGGAGCAAACCTGCAAGACATTTCCGTCTATTAATTTCCTCAAGGTGGAAATTGATGACCACCCCTACCTAGCGAAATCCGAAGGCGTGAGCTTTGTGCCAATGTTTAAAATATACAAAAATGGATTAAAGGTTAAGGAAATTCCAGGCAACAATCCAGAATTGTTAGAAAGATCGCTTAAGTTGTATAGCAGCTGA 2046 0.4238 MAGRAKNKMENEIGCGLIWRIFHLTSYKMRKSSVHSLPTKASNNVQNDHSKTESKKQSNLESKPTSTESHKPPRKSHSDHRKNRNQRPSDTARISASSSSNNSSQIKIQQYHKSNNDIRTQRQPTENSLELAKLSTHYKRENKNKSSIKLTGNLVVNNSPRSTTRSHENVPKNKEVTNSAPNKSYTNASVNVMGNIMRKSTDKLAQLRNPPNRVDPEVLKTMGNETYKEGRFEEALSLYEQAIAIDSSKATFHCNKSAALIGLGRLQEAIIECQQAIRLKPSYSRPYNRLATIYIRLGEAEKALSYNVATAHFDSAIALQAQSIRNHLQKCIEARKINAWDAILKETQSAISLGADASPQVYALQTEALLRLFRHQEACATYEKMPKFAINWCTKLFGLARSAYMFMIGAQAYLAAGRFKEAVTAAEQAANFDPSNKEVSVVVKRAKAMSSARTSGNLLFRASKYSEAYAVYNEGLEQDPYNSLLLCNRAACRSKLGQFEKAIEDCNAALAVRPSYSKARLRRADCNAKLERWEAAIQDYEMLLREKPGDEEVGKALFEAQTQLKILRGEDVKDFKFGCKLIYVSCNDRFQHYVSSPGMSVVLFCNKATHKQVLLVLEQTCKTFPSINFLKVEIDDHPYLAKSEGVSFVPMFKIYKNGLKVKEIPGNNPELLERSLKLYSS 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0420 681 SUPERFAMILY TPR-like 455 565 IPR011990 GO:0005515
Mibi05g0420 681 MobiDBLite consensus disorder prediction 35 127 - -
Mibi05g0420 681 Pfam Tetratricopeptide repeat 404 436 IPR019734 GO:0005515
Mibi05g0420 681 Gene3D Glutaredoxin 580 680 - -
Mibi05g0420 681 SUPERFAMILY Thioredoxin-like 501 676 IPR036249 -
Mibi05g0420 681 CDD TRX_family 590 670 - -
Mibi05g0420 681 ProSiteProfiles TPR repeat profile. 216 249 IPR019734 GO:0005515
Mibi05g0420 681 SUPERFAMILY TPR-like 216 438 IPR011990 GO:0005515
Mibi05g0420 681 Coils Coil 523 543 - -
Mibi05g0420 681 ProSiteProfiles TPR repeat profile. 449 482 IPR019734 GO:0005515
Mibi05g0420 681 SMART tpr_5 517 550 IPR019734 GO:0005515
Mibi05g0420 681 SMART tpr_5 216 249 IPR019734 GO:0005515
Mibi05g0420 681 SMART tpr_5 250 283 IPR019734 GO:0005515
Mibi05g0420 681 SMART tpr_5 403 436 IPR019734 GO:0005515
Mibi05g0420 681 SMART tpr_5 284 323 IPR019734 GO:0005515
Mibi05g0420 681 SMART tpr_5 449 482 IPR019734 GO:0005515
Mibi05g0420 681 SMART tpr_5 483 516 IPR019734 GO:0005515
Mibi05g0420 681 Pfam Tetratricopeptide repeat 485 516 IPR001440 GO:0005515
Mibi05g0420 681 MobiDBLite consensus disorder prediction 155 186 - -
Mibi05g0420 681 Gene3D Tetratricopeptide repeat domain 214 568 IPR011990 GO:0005515
Mibi05g0420 681 Pfam Thioredoxin 611 672 IPR013766 -
Mibi05g0420 681 Pfam TPR repeat 223 258 - -
Mibi05g0420 681 MobiDBLite consensus disorder prediction 89 127 - -
Mibi05g0420 681 ProSiteProfiles TPR repeat profile. 403 436 IPR019734 GO:0005515
Mibi05g0420 681 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 15 677 IPR044534 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0420 Mibi-ChrMibi05 4063355 4066140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0420 219 303 EF-hand Containing Proteins AT2G32450 30.588 2.28e-06 49.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi08g2294 08 40669369 40671854 Mibi05g0420 05 4063355 4066140 CCT
Mibi05g0420 05 4063355 4066140 Mibi05g0420 05 4063355 4066140 ECH