Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi08g2019 ATGGAAGGCGAGAAACTAAGTAGGCTTCTTCTTCCTTCTTTACTGTTTTTGTGTGTACTGTTGCTAGTGGGTTCAACTAGTGGGATTGGTGTGAATTGGGGGACACAGTCAACTCACCCACTGGGACCATCCACTGTGGTGAAAATGCTAAGAGACAATGGGATTCAGAAGGTTAAGCTATTTGATGCGGATCCAAATATTTTAGAGGCTTTGAAGAAATCTGGGATTCAAGTAATGGTGGGTATTCCTAATGATATGCTCTATACACTGGCTACTAATACGCAAGCTGCTGAAAGATGGGTTTCCAAGAATGTTTCTGCTCATGTCTCTTCTGGTGGTGTAGATATCAGGTATGTTGCTGTGGGGAATGAACCTTTCCTGTCAACTTTCAATGGCACCTTTGAATCCACAACTCTTCCAGCTCTTCAAAATATACAGGCAGCCCTCACGAAAGCTGGTTTGAGTAACCGAGTTAAAGTCACCGTCCCTCTAAATGCAGATGTGTATCAGAGTTCGTCCCAGAATCCTTCTGATGGTGATTTCCGGCCAAACATCCATGGACTGATGCTGCAGATTGTTAAATTCTTGAGTGACAATGGAGCTCCTTTTACAGTCAACATCTATCCATTCATCAGTCTCTATGCAGACTCGAATTTCCCAGTTGACTATGCCTTCTTTGACGGTTTTCAGAGTAATATAAATGACAATGGCAAAGCCTATGACAATGTATTCGATGCCAACCACGATACATTAGTCTGGGCATTGCAAAAGAATGGCTTTGGTAACTTGCCTATCATCATTGGAGAAATCGGGTGGCCAACCGATGGGGACCTCCATGCAAATCTTCAGTATGCTCAGCGCTTCAACCAAGGCTTCATGTCTCGCTACCTCACCGGGAAAGGGACTCCAATGAGGCCTGGCCCATTAGATGCATACCTGTTCAGCCTAATCGATGAAGATGCAAAGAGCATTCAGCCGGGCAACTTTGAACGCCATTGGGGAATGTTTTACTTTGATGGACAACCTAAGTATCAACTTAATCTTGGGTCAACAAGAACAAATGGTTTAGTGGGTGCCAGTGGGGTCCATCATCTAGGTAAAAGATGGTGTATAATGAAACCATCTGCTAATCTGAATGATGATCAAGTGGCTCCAAGTGTGTCTTATGCTTGTCAAAACGCAGATTGTACAAGTCTTGGCTATGGAACTTCATGTGGGAACTTAGATACAAGAGGTAATATTTCTTATGCTTTTAACAGCTACTTCCAGGTGAATGACCAGATGGAAAGTGCCTGCAAGTTCCCGGGTCTTTCTGTTGTCACTGATCAAGATCCTTCTAGGGGAAGTTGCAAGTTCATAACCATGATTGAGTCAGTTTCTGCTGAGAGACTTGCTTCTGTTAGAACATTGCTCTTTGTATTTTTCCTTTTCTCTCTTCTGTAA 1443 0.4324 MEGEKLSRLLLPSLLFLCVLLLVGSTSGIGVNWGTQSTHPLGPSTVVKMLRDNGIQKVKLFDADPNILEALKKSGIQVMVGIPNDMLYTLATNTQAAERWVSKNVSAHVSSGGVDIRYVAVGNEPFLSTFNGTFESTTLPALQNIQAALTKAGLSNRVKVTVPLNADVYQSSSQNPSDGDFRPNIHGLMLQIVKFLSDNGAPFTVNIYPFISLYADSNFPVDYAFFDGFQSNINDNGKAYDNVFDANHDTLVWALQKNGFGNLPIIIGEIGWPTDGDLHANLQYAQRFNQGFMSRYLTGKGTPMRPGPLDAYLFSLIDEDAKSIQPGNFERHWGMFYFDGQPKYQLNLGSTRTNGLVGASGVHHLGKRWCIMKPSANLNDDQVAPSVSYACQNADCTSLGYGTSCGNLDTRGNISYAFNSYFQVNDQMESACKFPGLSVVTDQDPSRGSCKFITMIESVSAERLASVRTLLFVFFLFSLL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi08g2019 480 FunFam Glucan endo-1,3-beta-glucosidase 8 364 461 - -
Mibi08g2019 480 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Mibi08g2019 480 Pfam X8 domain 369 437 IPR012946 -
Mibi08g2019 480 SMART X8_cls 368 452 IPR012946 -
Mibi08g2019 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 19 441 IPR044965 GO:0004553|GO:0005975
Mibi08g2019 480 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
Mibi08g2019 480 FunFam Glucan endo-1,3-beta-glucosidase 5 28 354 - -
Mibi08g2019 480 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Mibi08g2019 480 Gene3D Glycosidases 28 355 - -
Mibi08g2019 480 Gene3D - 365 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi08g2019 Mibi-ChrMibi08 37459189 37462133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi08g2019 15 467 Glycoside Hydrolase AT4G31140 70.897 0.0 685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0662 05 6292011 6294006 Mibi08g2019 08 37459189 37462133 CCT