Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mibi05g0662 ATGATGATGGGAAGAGTGAGATTTGGTGGGGTTACTATTGTGGCTTTGTTGTGTAGTGTGGTGATGGTGGGGATAGTGAGTGGGATTGGTGTGAACTGGGGGACACAGTCAACACACCCTTTGCCACCATCAACAGTGGTAAAATTGCTTAAAGACAATGGAATTCAGAAGGTGAAGCTGTTTGATGCAGATTCAGATATCCTGGATGCTCTAAAGAAGTCAGGGATCCAAGCGATGGTGGGTATTCCTAATGACATGCTCGCTTCACTTGCCAGTAGCGTCCAAGCTGCTGAAAAGTGGGTCTCCAAGAACGTTTCCTCTCACGTTTCTTCTGGTGGAGTAGACATCAGGTATGTTGCAGTGGGGAATGAACCTTTCTTGTCAACATATAATGGCACCTTTGAATCTACAACTCTTCCAGCTCTTCAAAACATCCAATCAGCTCTCATCAAATCCGGTTTGGCCAATCAGGTTAAAGTTACGGTCCCTCTAAATGCAGACGTGTATCAGAGTTCGTCGGACAAGCCTTCTGATGGGGACTTCCGGCCGGACATCCACGACCTCATGCTGAAGATTGTCAAATTCTTGAGTGACAATGGAGCCCCATTTACAGTCAACATCTACCCATTCATCAGCCTCTACAAAGACTCAAACTTTCCAGTTGACTATGCCTTCTTCAACGGCTATCAGACCCCCATAAACGACAACGGAAAGATATACGACAATGTGCTTGATGCCAACCATGACACGCTTGTTTGGGCATTGCAGAAAAATGGATTTGGAAACTTACCCATAATTGTGGGAGAGATTGGTTGGCCTACAGATGGAGACAGAAACGCAAATCTTCAGTATGCTCAGCGTTTCAACCAAGGCTTCATGTCTCGCTATATTGCAGGAAAAGGAACTCCAATGAGACCTGGTCCTGTAGATGCTTACCTGTTCAGCCTCATAGATGAAGACAATAAGAGTATTGAGCCTGGCAATTTTGAACGTCATTGGGGTCTGTTTTACTTCGATGGTCAGCCTAAATACCAGCTTAATATTGGATCTTCATCTAAAGGTTTAGTGGCCGCTAGTGGTGTGCATTATCTGGAGAAGAAGTGGTGCGTGTTGAAGCCTTCAGCTAATCTTAATGATGAACAAGTGCCACCAAGTGTGGCTTATGCTTGTGGGAGAGCAGATTGTACTAGCCTTGGATATGGGACTTCTTGTGGCAATTTAGATGCAAAGGGGAATATCTCTTATGCATTTAACAGTTACTACCAGGTAAATGACCAGCTTGATAGTGCATGCAAATTCCCAGGCCTCTCCATCGTTACTAATCAGGACCCTTCAGTTGGAGATTGCAAGTTCAGAATCATGATCCAGACGGATGCTGCTAACCCAGATAGGAGGGTTGGGCTTTTCTCGATAGTGCAGTTTCTGTTTTTGCTTTTTACTTTCCTGTAA 1449 0.4479 MMMGRVRFGGVTIVALLCSVVMVGIVSGIGVNWGTQSTHPLPPSTVVKLLKDNGIQKVKLFDADSDILDALKKSGIQAMVGIPNDMLASLASSVQAAEKWVSKNVSSHVSSGGVDIRYVAVGNEPFLSTYNGTFESTTLPALQNIQSALIKSGLANQVKVTVPLNADVYQSSSDKPSDGDFRPDIHDLMLKIVKFLSDNGAPFTVNIYPFISLYKDSNFPVDYAFFNGYQTPINDNGKIYDNVLDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPGPVDAYLFSLIDEDNKSIEPGNFERHWGLFYFDGQPKYQLNIGSSSKGLVAASGVHYLEKKWCVLKPSANLNDEQVPPSVAYACGRADCTSLGYGTSCGNLDAKGNISYAFNSYYQVNDQLDSACKFPGLSIVTNQDPSVGDCKFRIMIQTDAANPDRRVGLFSIVQFLFLLFTFL 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mibi05g0662 482 FunFam Glucan endo-1,3-beta-glucosidase 8 363 460 - -
Mibi05g0662 482 Pfam Glycosyl hydrolases family 17 29 347 IPR000490 GO:0004553|GO:0005975
Mibi05g0662 482 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
Mibi05g0662 482 FunFam Glucan endo-1,3-beta-glucosidase 5 28 354 - -
Mibi05g0662 482 Gene3D Glycosidases 28 354 - -
Mibi05g0662 482 Gene3D - 363 461 - -
Mibi05g0662 482 SUPERFAMILY (Trans)glycosidases 29 347 IPR017853 -
Mibi05g0662 482 SMART X8_cls 367 451 IPR012946 -
Mibi05g0662 482 Pfam X8 domain 367 436 IPR012946 -
Mibi05g0662 482 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 21 440 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mibi05g0662 Mibi-ChrMibi05 6292011 6294006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mibi05g0662 2 461 Glycoside Hydrolase AT4G31140 73.261 0.0 715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mibi05g0662 05 6292011 6294006 Mibi08g2019 08 37459189 37462133 CCT